Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_11530 | RahmanSF_2018_SRR5963418_bin.7_k141_11530_305 | 313736 | 316363 | + | GT51 |
| pfam | RahmanSF_2018_SRR5963418_bin.7_k141_11530 | RahmanSF_2018_SRR5963418_bin.7_k141_11530_306 | 316416 | 316775 | - | SpoVAC_SpoVAEB |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_11530 | RahmanSF_2018_SRR5963418_bin.7_k141_11530_307 | 316779 | 317795 | - | 9.A.11.1.1 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_11530 | RahmanSF_2018_SRR5963418_bin.7_k141_11530_308 | 317800 | 318264 | - | 9.A.11.1.1 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_305
Type: CAZyme
Location: 313736 - 316363 (+)
Type: CAZyme
Location: 313736 - 316363 (+)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_306
Type: pfam
Location: 316416 - 316775 (-)
Type: pfam
Location: 316416 - 316775 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_307
Type: TC
Location: 316779 - 317795 (-)
Type: TC
Location: 316779 - 317795 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_308
Type: TC
Location: 317800 - 318264 (-)
Type: TC
Location: 317800 - 318264 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.