Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963418_bin.7
- CGC Family ID: CGCFAM_00005
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_11530 | RahmanSF_2018_SRR5963418_bin.7_k141_11530_2 | 695 | 1717 | - | 9.B.18.2.1 |
| CAZyme | RahmanSF_2018_SRR5963418_bin.7_k141_11530 | RahmanSF_2018_SRR5963418_bin.7_k141_11530_3 | 1759 | 2955 | - | GT113 |
| TC | RahmanSF_2018_SRR5963418_bin.7_k141_11530 | RahmanSF_2018_SRR5963418_bin.7_k141_11530_4 | 2988 | 3584 | - | 9.B.18.1.3 |
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_2
Type: TC
Location: 695 - 1717 (-)
Type: TC
Location: 695 - 1717 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_3
Type: CAZyme
Location: 1759 - 2955 (-)
Type: CAZyme
Location: 1759 - 2955 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_11530_4
Type: TC
Location: 2988 - 3584 (-)
Type: TC
Location: 2988 - 3584 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium_J
Species
Clostridium_J sp900548455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.