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Cluster: RahmanSF_2018_SRR5963418_bin.7_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC RahmanSF_2018_SRR5963418_bin.7_k141_10963 RahmanSF_2018_SRR5963418_bin.7_k141_10963_153 159214 160317 - 2.A.3.9.1
TC RahmanSF_2018_SRR5963418_bin.7_k141_10963 RahmanSF_2018_SRR5963418_bin.7_k141_10963_154 160337 161797 - 9.A.11.1.2
NULL(UNKNOWN) RahmanSF_2018_SRR5963418_bin.7_k141_10963 RahmanSF_2018_SRR5963418_bin.7_k141_10963_155 161820 162020 - NULL(UNKNOWN)
[View Structural Homologs]
pfam RahmanSF_2018_SRR5963418_bin.7_k141_10963 RahmanSF_2018_SRR5963418_bin.7_k141_10963_156 162183 163034 - GHMP_kinases_N | GHMP_kinases_C
CAZyme RahmanSF_2018_SRR5963418_bin.7_k141_10963 RahmanSF_2018_SRR5963418_bin.7_k141_10963_157 163258 164820 - CBM50
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_10963_153
Type: TC
Location: 159214 - 160317 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_10963_154
Type: TC
Location: 160337 - 161797 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_10963_155
Type:
Location: 161820 - 162020 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_10963_156
Type: pfam
Location: 162183 - 163034 (-)
Gene ID: RahmanSF_2018_SRR5963418_bin.7_k141_10963_157
Type: CAZyme
Location: 163258 - 164820 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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