Cluster: RahmanSF_2018_SRR5963402_bin.6_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963402_bin.6
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_10977 | RahmanSF_2018_SRR5963402_bin.6_k141_10977_34 | 31316 | 32131 | - | CE4 |
| pfam | RahmanSF_2018_SRR5963402_bin.6_k141_10977 | RahmanSF_2018_SRR5963402_bin.6_k141_10977_35 | 32137 | 32979 | - | LGT |
| STP | RahmanSF_2018_SRR5963402_bin.6_k141_10977 | RahmanSF_2018_SRR5963402_bin.6_k141_10977_36 | 33064 | 33294 | - | FeoA |
| TC | RahmanSF_2018_SRR5963402_bin.6_k141_10977 | RahmanSF_2018_SRR5963402_bin.6_k141_10977_37 | 33312 | 35246 | - | 9.A.8.1.8 |
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_10977_34
Type: CAZyme
Location: 31316 - 32131 (-)
Type: CAZyme
Location: 31316 - 32131 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_10977_35
Type: pfam
Location: 32137 - 32979 (-)
Type: pfam
Location: 32137 - 32979 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_10977_36
Type: STP
Location: 33064 - 33294 (-)
Type: STP
Location: 33064 - 33294 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_10977_37
Type: TC
Location: 33312 - 35246 (-)
Type: TC
Location: 33312 - 35246 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
UMGS1260
Family
UMGS1260
Genus
UMGS1260
Species
UMGS1260 sp900550105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.