Cluster: RahmanSF_2018_SRR5963402_bin.6_CGC22
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963402_bin.6
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963402_bin.6_k141_24066 | RahmanSF_2018_SRR5963402_bin.6_k141_24066_86 | 107373 | 108731 | + | 2.A.1.4.2 |
| pfam | RahmanSF_2018_SRR5963402_bin.6_k141_24066 | RahmanSF_2018_SRR5963402_bin.6_k141_24066_87 | 108800 | 109315 | - | LprI |
| STP | RahmanSF_2018_SRR5963402_bin.6_k141_24066 | RahmanSF_2018_SRR5963402_bin.6_k141_24066_88 | 109328 | 110398 | - | HD |
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_24066 | RahmanSF_2018_SRR5963402_bin.6_k141_24066_89 | 110634 | 112052 | + | AA4 |
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_24066_86
Type: TC
Location: 107373 - 108731 (+)
Type: TC
Location: 107373 - 108731 (+)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_24066_87
Type: pfam
Location: 108800 - 109315 (-)
Type: pfam
Location: 108800 - 109315 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_24066_88
Type: STP
Location: 109328 - 110398 (-)
Type: STP
Location: 109328 - 110398 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_24066_89
Type: CAZyme
Location: 110634 - 112052 (+)
Type: CAZyme
Location: 110634 - 112052 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
UMGS1260
Family
UMGS1260
Genus
UMGS1260
Species
UMGS1260 sp900550105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.