Cluster: RahmanSF_2018_SRR5963402_bin.6_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963402_bin.6
- CGC Family ID: CGCFAM_04317
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_171 | 206950 | 208431 | - | 9.B.18.1.2 |
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_172 | 208524 | 209570 | - | GT9 |
| pfam | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_173 | 209548 | 210771 | - | Wzy_C |
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_174 | 210797 | 211927 | - | GT4 |
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_175 | 211938 | 212939 | - | GT9 |
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_176 | 212915 | 213958 | - | GT9 |
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_177 | 213955 | 214986 | - | GT9 |
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_171
Type: TC
Location: 206950 - 208431 (-)
Type: TC
Location: 206950 - 208431 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_172
Type: CAZyme
Location: 208524 - 209570 (-)
Type: CAZyme
Location: 208524 - 209570 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_173
Type: pfam
Location: 209548 - 210771 (-)
Type: pfam
Location: 209548 - 210771 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_174
Type: CAZyme
Location: 210797 - 211927 (-)
Type: CAZyme
Location: 210797 - 211927 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_175
Type: CAZyme
Location: 211938 - 212939 (-)
Type: CAZyme
Location: 211938 - 212939 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_176
Type: CAZyme
Location: 212915 - 213958 (-)
Type: CAZyme
Location: 212915 - 213958 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_177
Type: CAZyme
Location: 213955 - 214986 (-)
Type: CAZyme
Location: 213955 - 214986 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
UMGS1260
Family
UMGS1260
Genus
UMGS1260
Species
UMGS1260 sp900550105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.