Cluster: RahmanSF_2018_SRR5963402_bin.6_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963402_bin.6
- CGC Family ID: CGCFAM_00008
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_162 | 195860 | 197395 | - | GT2 |
| TC | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_163 | 197398 | 198771 | - | 3.A.1.103.6 |
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_164 | 198775 | 199623 | - | GT2 |
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_14567 | RahmanSF_2018_SRR5963402_bin.6_k141_14567_165 | 199620 | 202352 | - | GT2 | GT2 |
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_162
Type: CAZyme
Location: 195860 - 197395 (-)
Type: CAZyme
Location: 195860 - 197395 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_163
Type: TC
Location: 197398 - 198771 (-)
Type: TC
Location: 197398 - 198771 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_164
Type: CAZyme
Location: 198775 - 199623 (-)
Type: CAZyme
Location: 198775 - 199623 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_165
Type: CAZyme
Location: 199620 - 202352 (-)
Type: CAZyme
Location: 199620 - 202352 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
UMGS1260
Family
UMGS1260
Genus
UMGS1260
Species
UMGS1260 sp900550105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.