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Cluster: RahmanSF_2018_SRR5963402_bin.6_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_69 85235 86374 - GT4
TC RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_70 86467 87831 - 9.B.18.1.3
pfam RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_71 87844 89235 - Pect-lyase_RHGA_epim
CAZyme RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_72 89190 90422 - GT4
pfam RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_73 90422 91660 - Wzy_C
pfam RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_74 91664 92605 - Glycos_transf_2 | Glyco_tranf_2_2
TC RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_75 92622 93296 - 8.A.3.1.2
TC RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_76 93327 94730 - 8.A.3.1.3
TC RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_77 94761 95504 - 1.B.18.3.7
TC RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_78 95534 97231 - 1.B.20.1.3
TC RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_79 97441 98199 - 3.A.1.3.12
pfam RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_80 98421 98714 - zf_Tbcl | zf_Tbcl_2
CAZyme RahmanSF_2018_SRR5963402_bin.6_k141_14567 RahmanSF_2018_SRR5963402_bin.6_k141_14567_81 99033 100136 - GH177
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_69
Type: CAZyme
Location: 85235 - 86374 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_70
Type: TC
Location: 86467 - 87831 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_71
Type: pfam
Location: 87844 - 89235 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_72
Type: CAZyme
Location: 89190 - 90422 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_73
Type: pfam
Location: 90422 - 91660 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_74
Type: pfam
Location: 91664 - 92605 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_75
Type: TC
Location: 92622 - 93296 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_76
Type: TC
Location: 93327 - 94730 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_77
Type: TC
Location: 94761 - 95504 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_78
Type: TC
Location: 95534 - 97231 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_79
Type: TC
Location: 97441 - 98199 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_80
Type: pfam
Location: 98421 - 98714 (-)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_14567_81
Type: CAZyme
Location: 99033 - 100136 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
UMGS1260
→
Family
UMGS1260
→
Genus
UMGS1260
→
Species
UMGS1260 sp900550105

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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