Cluster: RahmanSF_2018_SRR5963402_bin.6_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963402_bin.6
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963402_bin.6_k141_13501 | RahmanSF_2018_SRR5963402_bin.6_k141_13501_3 | 2066 | 3694 | + | GT28 |
| TC | RahmanSF_2018_SRR5963402_bin.6_k141_13501 | RahmanSF_2018_SRR5963402_bin.6_k141_13501_4 | 3810 | 4889 | + | 3.A.11.1.3 |
| TC | RahmanSF_2018_SRR5963402_bin.6_k141_13501 | RahmanSF_2018_SRR5963402_bin.6_k141_13501_5 | 4886 | 7108 | + | 3.A.7.7.1 |
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_13501_3
Type: CAZyme
Location: 2066 - 3694 (+)
Type: CAZyme
Location: 2066 - 3694 (+)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_13501_4
Type: TC
Location: 3810 - 4889 (+)
Type: TC
Location: 3810 - 4889 (+)
Gene ID: RahmanSF_2018_SRR5963402_bin.6_k141_13501_5
Type: TC
Location: 4886 - 7108 (+)
Type: TC
Location: 4886 - 7108 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
UMGS1260
Family
UMGS1260
Genus
UMGS1260
Species
UMGS1260 sp900550105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.