Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- CGC Family ID: CGCFAM_06575
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_4052 | RahmanSF_2018_SRR5963400_bin.7_k141_4052_2 | 504 | 6176 | + | CBM32 | GH101 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_4052 | RahmanSF_2018_SRR5963400_bin.7_k141_4052_3 | 6296 | 6913 | + | CBM9_2 |
| STP | RahmanSF_2018_SRR5963400_bin.7_k141_4052 | RahmanSF_2018_SRR5963400_bin.7_k141_4052_4 | 6948 | 8690 | - | Fer4 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_4052 | RahmanSF_2018_SRR5963400_bin.7_k141_4052_5 | 8684 | 10516 | - | 3.D.1.5.1 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_4052 | RahmanSF_2018_SRR5963400_bin.7_k141_4052_6 | 10764 | 11930 | + | GHMP_kinases_N | GHMP_kinases_C | GalKase_gal_bdg |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_4052 | RahmanSF_2018_SRR5963400_bin.7_k141_4052_7 | 11953 | 13443 | + | GalP_UDP_transf | GalP_UDP_tr_C |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_4052 | RahmanSF_2018_SRR5963400_bin.7_k141_4052_8 | 13651 | 20733 | + | GH2 | GH2 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_4052_2
Type: CAZyme
Location: 504 - 6176 (+)
Type: CAZyme
Location: 504 - 6176 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_4052_3
Type: pfam
Location: 6296 - 6913 (+)
Type: pfam
Location: 6296 - 6913 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_4052_4
Type: STP
Location: 6948 - 8690 (-)
Type: STP
Location: 6948 - 8690 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_4052_5
Type: TC
Location: 8684 - 10516 (-)
Type: TC
Location: 8684 - 10516 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_4052_6
Type: pfam
Location: 10764 - 11930 (+)
Type: pfam
Location: 10764 - 11930 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_4052_7
Type: pfam
Location: 11953 - 13443 (+)
Type: pfam
Location: 11953 - 13443 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_4052_8
Type: CAZyme
Location: 13651 - 20733 (+)
Type: CAZyme
Location: 13651 - 20733 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.