Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- CGC Family ID: CGCFAM_00005
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2737 | RahmanSF_2018_SRR5963400_bin.7_k141_2737_80 | 69900 | 70988 | - | GT4 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2737 | RahmanSF_2018_SRR5963400_bin.7_k141_2737_81 | 71002 | 72060 | - | GT2 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2737 | RahmanSF_2018_SRR5963400_bin.7_k141_2737_82 | 72060 | 73124 | - | GT2 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_2737 | RahmanSF_2018_SRR5963400_bin.7_k141_2737_83 | 73136 | 74236 | - | GLF | NAD_binding_8 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_2737 | RahmanSF_2018_SRR5963400_bin.7_k141_2737_84 | 74236 | 75633 | - | 9.B.18.1.3 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2737_80
Type: CAZyme
Location: 69900 - 70988 (-)
Type: CAZyme
Location: 69900 - 70988 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2737_81
Type: CAZyme
Location: 71002 - 72060 (-)
Type: CAZyme
Location: 71002 - 72060 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2737_82
Type: CAZyme
Location: 72060 - 73124 (-)
Type: CAZyme
Location: 72060 - 73124 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2737_83
Type: pfam
Location: 73136 - 74236 (-)
Type: pfam
Location: 73136 - 74236 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2737_84
Type: TC
Location: 74236 - 75633 (-)
Type: TC
Location: 74236 - 75633 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.