Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- CGC Family ID: CGCFAM_00015
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_236 | 207098 | 208468 | + | 2.A.35.2.1 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_237 | 208481 | 209608 | + | GT4 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_238 | 209601 | 210395 | + | GT2 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_239 | 210425 | 211504 | + | EpsG |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_240 | 211547 | 212671 | + | GT4 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_241 | 212688 | 213674 | + | GT2 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_242 | 213677 | 214597 | + | GT2 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_243 | 214607 | 215785 | + | GT4 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_244 | 215804 | 216784 | + | Acyl_transf_3 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_245 | 216781 | 217746 | + | GT2 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_246 | 217746 | 219278 | + | 2.A.66.1.40 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_236
Type: TC
Location: 207098 - 208468 (+)
Type: TC
Location: 207098 - 208468 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_237
Type: CAZyme
Location: 208481 - 209608 (+)
Type: CAZyme
Location: 208481 - 209608 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_238
Type: CAZyme
Location: 209601 - 210395 (+)
Type: CAZyme
Location: 209601 - 210395 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_239
Type: pfam
Location: 210425 - 211504 (+)
Type: pfam
Location: 210425 - 211504 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_240
Type: CAZyme
Location: 211547 - 212671 (+)
Type: CAZyme
Location: 211547 - 212671 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_241
Type: CAZyme
Location: 212688 - 213674 (+)
Type: CAZyme
Location: 212688 - 213674 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_242
Type: CAZyme
Location: 213677 - 214597 (+)
Type: CAZyme
Location: 213677 - 214597 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_243
Type: CAZyme
Location: 214607 - 215785 (+)
Type: CAZyme
Location: 214607 - 215785 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_244
Type: pfam
Location: 215804 - 216784 (+)
Type: pfam
Location: 215804 - 216784 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_245
Type: CAZyme
Location: 216781 - 217746 (+)
Type: CAZyme
Location: 216781 - 217746 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_246
Type: TC
Location: 217746 - 219278 (+)
Type: TC
Location: 217746 - 219278 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.