Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC4
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- CGC Family ID: CGCFAM_01858
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_84 | 72322 | 73173 | + | 3.A.1.25.4 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_85 | 73158 | 74000 | + | 3.A.1.26.7 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_86 | 73997 | 74821 | + | 3.A.1.25.4 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_87 | 74907 | 75644 | + | PseudoU_synth_1 | PseudoU_synth_1 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_88 | 75875 | 76831 | + | RVT_1 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_89 | 76837 | 78945 | + | 3.A.7.7.1 |
| sulfatase | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_90 | 79074 | 79805 | + | S1_9 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_91 | 79817 | 80923 | + | CE9 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_92 | 81303 | 82526 | + | tRNA-synt_1b | S4 | SYY_C-terminal |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_93 | 82579 | 82770 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_2732 | RahmanSF_2018_SRR5963400_bin.7_k141_2732_94 | 83014 | 85389 | + | 3.A.3.23.2 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_84
Type: TC
Location: 72322 - 73173 (+)
Type: TC
Location: 72322 - 73173 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_85
Type: TC
Location: 73158 - 74000 (+)
Type: TC
Location: 73158 - 74000 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_86
Type: TC
Location: 73997 - 74821 (+)
Type: TC
Location: 73997 - 74821 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_87
Type: pfam
Location: 74907 - 75644 (+)
Type: pfam
Location: 74907 - 75644 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_88
Type: pfam
Location: 75875 - 76831 (+)
Type: pfam
Location: 75875 - 76831 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_89
Type: TC
Location: 76837 - 78945 (+)
Type: TC
Location: 76837 - 78945 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_90
Type: sulfatase
Location: 79074 - 79805 (+)
Type: sulfatase
Location: 79074 - 79805 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_91
Type: CAZyme
Location: 79817 - 80923 (+)
Type: CAZyme
Location: 79817 - 80923 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_92
Type: pfam
Location: 81303 - 82526 (+)
Type: pfam
Location: 81303 - 82526 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_93
Type:
Location: 82579 - 82770 (-)
Type:
Location: 82579 - 82770 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_2732_94
Type: TC
Location: 83014 - 85389 (+)
Type: TC
Location: 83014 - 85389 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.