Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_10098 | RahmanSF_2018_SRR5963400_bin.7_k141_10098_85 | 100560 | 101360 | - | CE4 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_10098 | RahmanSF_2018_SRR5963400_bin.7_k141_10098_86 | 101462 | 103039 | + | 2.A.49.5.5 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_10098 | RahmanSF_2018_SRR5963400_bin.7_k141_10098_87 | 103036 | 103518 | + | DNA_binding_1 | Methyltransf_1N |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_10098 | RahmanSF_2018_SRR5963400_bin.7_k141_10098_88 | 103767 | 109349 | + | CBM32 | CBM32 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_10098_85
Type: CAZyme
Location: 100560 - 101360 (-)
Type: CAZyme
Location: 100560 - 101360 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_10098_86
Type: TC
Location: 101462 - 103039 (+)
Type: TC
Location: 101462 - 103039 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_10098_87
Type: pfam
Location: 103036 - 103518 (+)
Type: pfam
Location: 103036 - 103518 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_10098_88
Type: CAZyme
Location: 103767 - 109349 (+)
Type: CAZyme
Location: 103767 - 109349 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.