Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- CGC Family ID: CGCFAM_06573
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_9730 | RahmanSF_2018_SRR5963400_bin.7_k141_9730_31 | 26638 | 30990 | + | GH29 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_9730 | RahmanSF_2018_SRR5963400_bin.7_k141_9730_32 | 30990 | 31877 | + | RelA_SpoT |
| peptidase | RahmanSF_2018_SRR5963400_bin.7_k141_9730 | RahmanSF_2018_SRR5963400_bin.7_k141_9730_33 | 32027 | 33298 | + | M38.UPW |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_9730 | RahmanSF_2018_SRR5963400_bin.7_k141_9730_34 | 33360 | 35672 | - | 9.B.74.1.4 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_9730 | RahmanSF_2018_SRR5963400_bin.7_k141_9730_35 | 35693 | 37801 | - | 2.A.6.5.1 |
| STP | RahmanSF_2018_SRR5963400_bin.7_k141_9730 | RahmanSF_2018_SRR5963400_bin.7_k141_9730_36 | 37966 | 38562 | + | TetR_N |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_9730 | RahmanSF_2018_SRR5963400_bin.7_k141_9730_37 | 38702 | 40198 | + | 1.C.12.1.8 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_9730_31
Type: CAZyme
Location: 26638 - 30990 (+)
Type: CAZyme
Location: 26638 - 30990 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_9730_32
Type: pfam
Location: 30990 - 31877 (+)
Type: pfam
Location: 30990 - 31877 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_9730_33
Type: peptidase
Location: 32027 - 33298 (+)
Type: peptidase
Location: 32027 - 33298 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_9730_34
Type: TC
Location: 33360 - 35672 (-)
Type: TC
Location: 33360 - 35672 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_9730_35
Type: TC
Location: 35693 - 37801 (-)
Type: TC
Location: 35693 - 37801 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_9730_36
Type: STP
Location: 37966 - 38562 (+)
Type: STP
Location: 37966 - 38562 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_9730_37
Type: TC
Location: 38702 - 40198 (+)
Type: TC
Location: 38702 - 40198 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.