Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_8997 | RahmanSF_2018_SRR5963400_bin.7_k141_8997_17 | 18244 | 20409 | + | GH112 |
| TF | RahmanSF_2018_SRR5963400_bin.7_k141_8997 | RahmanSF_2018_SRR5963400_bin.7_k141_8997_18 | 20537 | 21424 | - | HTH_AraC |
| TF | RahmanSF_2018_SRR5963400_bin.7_k141_8997 | RahmanSF_2018_SRR5963400_bin.7_k141_8997_19 | 21462 | 22286 | - | HTH_AraC | HTH_AraC |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_8997 | RahmanSF_2018_SRR5963400_bin.7_k141_8997_20 | 22335 | 22880 | - | 2.A.51.1.6 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_8997_17
Type: CAZyme
Location: 18244 - 20409 (+)
Type: CAZyme
Location: 18244 - 20409 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_8997_18
Type: TF
Location: 20537 - 21424 (-)
Type: TF
Location: 20537 - 21424 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_8997_19
Type: TF
Location: 21462 - 22286 (-)
Type: TF
Location: 21462 - 22286 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_8997_20
Type: TC
Location: 22335 - 22880 (-)
Type: TC
Location: 22335 - 22880 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.