Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- CGC Family ID: CGCFAM_03010
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6787 | RahmanSF_2018_SRR5963400_bin.7_k141_6787_63 | 68173 | 69411 | - | 2.A.1.24.4 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_6787 | RahmanSF_2018_SRR5963400_bin.7_k141_6787_64 | 69428 | 70216 | - | Zn_dep_PLPC |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6787 | RahmanSF_2018_SRR5963400_bin.7_k141_6787_65 | 70281 | 71528 | - | 5.A.1.2.7 |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_6787 | RahmanSF_2018_SRR5963400_bin.7_k141_6787_66 | 71658 | 74663 | - | GH136 |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963400_bin.7_k141_6787 | RahmanSF_2018_SRR5963400_bin.7_k141_6787_67 | 74724 | 75536 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | RahmanSF_2018_SRR5963400_bin.7_k141_6787 | RahmanSF_2018_SRR5963400_bin.7_k141_6787_68 | 75733 | 76602 | + | HTH_AraC | HTH_AraC |
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_6787 | RahmanSF_2018_SRR5963400_bin.7_k141_6787_69 | 76648 | 78606 | - | CBM32 | GH30_1 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6787_63
Type: TC
Location: 68173 - 69411 (-)
Type: TC
Location: 68173 - 69411 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6787_64
Type: pfam
Location: 69428 - 70216 (-)
Type: pfam
Location: 69428 - 70216 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6787_65
Type: TC
Location: 70281 - 71528 (-)
Type: TC
Location: 70281 - 71528 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6787_66
Type: CAZyme
Location: 71658 - 74663 (-)
Type: CAZyme
Location: 71658 - 74663 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6787_67
Type:
Location: 74724 - 75536 (-)
Type:
Location: 74724 - 75536 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6787_68
Type: TF
Location: 75733 - 76602 (+)
Type: TF
Location: 75733 - 76602 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6787_69
Type: CAZyme
Location: 76648 - 78606 (-)
Type: CAZyme
Location: 76648 - 78606 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.