Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_48 | 50260 | 51324 | + | GT28 |
| STP | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_49 | 51384 | 51953 | - | Sigma70_r2 | Sigma70_r4_2 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_50 | 51987 | 52391 | - | HIT | DcpS_C |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_51 | 52502 | 53242 | + | 2.A.21.9.1 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_52 | 53180 | 53791 | - | 9.B.104.1.3 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_48
Type: CAZyme
Location: 50260 - 51324 (+)
Type: CAZyme
Location: 50260 - 51324 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_49
Type: STP
Location: 51384 - 51953 (-)
Type: STP
Location: 51384 - 51953 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_50
Type: pfam
Location: 51987 - 52391 (-)
Type: pfam
Location: 51987 - 52391 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_51
Type: TC
Location: 52502 - 53242 (+)
Type: TC
Location: 52502 - 53242 (+)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_52
Type: TC
Location: 53180 - 53791 (-)
Type: TC
Location: 53180 - 53791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.