Cluster: RahmanSF_2018_SRR5963400_bin.7_CGC10
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963400_bin.7
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_4 | 3297 | 9389 | - | CBM51 | CBM51 | GH2 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_5 | 9547 | 9948 | - | 3.A.2.1.5 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_6 | 9961 | 11352 | - | 3.A.2.1.5 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_7 | 11392 | 12252 | - | 3.A.2.1.5 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_8 | 12269 | 13771 | - | 3.A.2.1.5 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_9 | 13799 | 14344 | - | 3.A.2.1.2 |
| pfam | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_10 | 14332 | 14847 | - | ATP-synt_B |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_11 | 14891 | 15157 | - | 3.A.2.1.5 |
| TC | RahmanSF_2018_SRR5963400_bin.7_k141_6264 | RahmanSF_2018_SRR5963400_bin.7_k141_6264_12 | 15197 | 15916 | - | 3.A.2.1.5 |
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_4
Type: CAZyme
Location: 3297 - 9389 (-)
Type: CAZyme
Location: 3297 - 9389 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_5
Type: TC
Location: 9547 - 9948 (-)
Type: TC
Location: 9547 - 9948 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_6
Type: TC
Location: 9961 - 11352 (-)
Type: TC
Location: 9961 - 11352 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_7
Type: TC
Location: 11392 - 12252 (-)
Type: TC
Location: 11392 - 12252 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_8
Type: TC
Location: 12269 - 13771 (-)
Type: TC
Location: 12269 - 13771 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_9
Type: TC
Location: 13799 - 14344 (-)
Type: TC
Location: 13799 - 14344 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_10
Type: pfam
Location: 14332 - 14847 (-)
Type: pfam
Location: 14332 - 14847 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_11
Type: TC
Location: 14891 - 15157 (-)
Type: TC
Location: 14891 - 15157 (-)
Gene ID: RahmanSF_2018_SRR5963400_bin.7_k141_6264_12
Type: TC
Location: 15197 - 15916 (-)
Type: TC
Location: 15197 - 15916 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas sp900551895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| RahmanSF_2018_SRR5963400_bin.7_k141_6264_11 | vegetarian > vegan | 1.38031 | 0.00289 |