Cluster: RahmanSF_2018_SRR5963280_bin.15_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963280_bin.15
- CGC Family ID: CGCFAM_02792
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963280_bin.15_k141_11104 | RahmanSF_2018_SRR5963280_bin.15_k141_11104_4 | 2298 | 4517 | - | 3.A.1.112.9 |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963280_bin.15_k141_11104 | RahmanSF_2018_SRR5963280_bin.15_k141_11104_5 | 4788 | 4931 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | RahmanSF_2018_SRR5963280_bin.15_k141_11104 | RahmanSF_2018_SRR5963280_bin.15_k141_11104_6 | 5207 | 6064 | - | HTH_3 |
| CAZyme | RahmanSF_2018_SRR5963280_bin.15_k141_11104 | RahmanSF_2018_SRR5963280_bin.15_k141_11104_7 | 6197 | 6826 | - | CBM50 |
Gene ID: RahmanSF_2018_SRR5963280_bin.15_k141_11104_4
Type: TC
Location: 2298 - 4517 (-)
Type: TC
Location: 2298 - 4517 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.15_k141_11104_5
Type:
Location: 4788 - 4931 (-)
Type:
Location: 4788 - 4931 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.15_k141_11104_6
Type: TF
Location: 5207 - 6064 (-)
Type: TF
Location: 5207 - 6064 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.15_k141_11104_7
Type: CAZyme
Location: 6197 - 6826 (-)
Type: CAZyme
Location: 6197 - 6826 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.