Cluster: RahmanSF_2018_SRR5963280_bin.12_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963280_bin.12
- CGC Family ID: CGCFAM_10409
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963280_bin.12_k141_10869 | RahmanSF_2018_SRR5963280_bin.12_k141_10869_158 | 149689 | 151101 | - | AA4 |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963280_bin.12_k141_10869 | RahmanSF_2018_SRR5963280_bin.12_k141_10869_159 | 151274 | 152710 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | RahmanSF_2018_SRR5963280_bin.12_k141_10869 | RahmanSF_2018_SRR5963280_bin.12_k141_10869_160 | 153171 | 159749 | - | S08.UPA |
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_10869 | RahmanSF_2018_SRR5963280_bin.12_k141_10869_161 | 160322 | 162034 | + | 2.A.118.1.8 |
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_10869_158
Type: CAZyme
Location: 149689 - 151101 (-)
Type: CAZyme
Location: 149689 - 151101 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_10869_159
Type:
Location: 151274 - 152710 (+)
Type:
Location: 151274 - 152710 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_10869_160
Type: peptidase
Location: 153171 - 159749 (-)
Type: peptidase
Location: 153171 - 159749 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_10869_161
Type: TC
Location: 160322 - 162034 (+)
Type: TC
Location: 160322 - 162034 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_A
Species
Peptoniphilus_A gorbachii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.