Cluster: RahmanSF_2018_SRR5963280_bin.12_CGC5
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963280_bin.12
- CGC Family ID: CGCFAM_10403
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_29 | 27995 | 29038 | + | CE4 |
| pfam | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_30 | 29120 | 30595 | - | tRNA-synt_1c | Anticodon_2 |
| pfam | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_31 | 30611 | 32173 | - | SLH | SLH | SLH |
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_32 | 32245 | 33570 | - | 2.A.40.7.6 |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_33 | 33717 | 34355 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_34 | 34352 | 34972 | - | ABC2_membrane_5 |
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_35 | 34969 | 35808 | - | 3.A.1.149.1 |
| TF | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_36 | 35805 | 36185 | - | GntR |
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_37 | 36323 | 39022 | - | 3.A.3.2.21 |
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_29
Type: CAZyme
Location: 27995 - 29038 (+)
Type: CAZyme
Location: 27995 - 29038 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_30
Type: pfam
Location: 29120 - 30595 (-)
Type: pfam
Location: 29120 - 30595 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_31
Type: pfam
Location: 30611 - 32173 (-)
Type: pfam
Location: 30611 - 32173 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_32
Type: TC
Location: 32245 - 33570 (-)
Type: TC
Location: 32245 - 33570 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_33
Type:
Location: 33717 - 34355 (-)
Type:
Location: 33717 - 34355 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_34
Type: pfam
Location: 34352 - 34972 (-)
Type: pfam
Location: 34352 - 34972 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_35
Type: TC
Location: 34969 - 35808 (-)
Type: TC
Location: 34969 - 35808 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_36
Type: TF
Location: 35805 - 36185 (-)
Type: TF
Location: 35805 - 36185 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_37
Type: TC
Location: 36323 - 39022 (-)
Type: TC
Location: 36323 - 39022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_A
Species
Peptoniphilus_A gorbachii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.