Cluster: RahmanSF_2018_SRR5963280_bin.12_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963280_bin.12
- CGC Family ID: CGCFAM_03616
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_12 | 10567 | 11106 | + | 3.A.1.25.5 |
| CAZyme | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_13 | 11240 | 13663 | + | GT51 |
| pfam | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_14 | 13718 | 14653 | - | Mem_trans |
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_6338 | RahmanSF_2018_SRR5963280_bin.12_k141_6338_15 | 14724 | 16688 | - | 3.A.16.1.1 |
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_12
Type: TC
Location: 10567 - 11106 (+)
Type: TC
Location: 10567 - 11106 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_13
Type: CAZyme
Location: 11240 - 13663 (+)
Type: CAZyme
Location: 11240 - 13663 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_14
Type: pfam
Location: 13718 - 14653 (-)
Type: pfam
Location: 13718 - 14653 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_6338_15
Type: TC
Location: 14724 - 16688 (-)
Type: TC
Location: 14724 - 16688 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_A
Species
Peptoniphilus_A gorbachii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.