Cluster: RahmanSF_2018_SRR5963280_bin.12_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963280_bin.12
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963280_bin.12_k141_5824 | RahmanSF_2018_SRR5963280_bin.12_k141_5824_76 | 69628 | 72522 | + | GT51 |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963280_bin.12_k141_5824 | RahmanSF_2018_SRR5963280_bin.12_k141_5824_77 | 72531 | 72707 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | RahmanSF_2018_SRR5963280_bin.12_k141_5824 | RahmanSF_2018_SRR5963280_bin.12_k141_5824_78 | 72795 | 73307 | - | Macro |
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_5824 | RahmanSF_2018_SRR5963280_bin.12_k141_5824_79 | 73458 | 74963 | - | 2.A.35.2.1 |
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_5824_76
Type: CAZyme
Location: 69628 - 72522 (+)
Type: CAZyme
Location: 69628 - 72522 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_5824_77
Type:
Location: 72531 - 72707 (+)
Type:
Location: 72531 - 72707 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_5824_78
Type: pfam
Location: 72795 - 73307 (-)
Type: pfam
Location: 72795 - 73307 (-)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_5824_79
Type: TC
Location: 73458 - 74963 (-)
Type: TC
Location: 73458 - 74963 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_A
Species
Peptoniphilus_A gorbachii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.