Cluster: RahmanSF_2018_SRR5963280_bin.12_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963280_bin.12
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_3168 | RahmanSF_2018_SRR5963280_bin.12_k141_3168_111 | 124643 | 125593 | + | 9.B.146.1.6 |
| pfam | RahmanSF_2018_SRR5963280_bin.12_k141_3168 | RahmanSF_2018_SRR5963280_bin.12_k141_3168_112 | 125603 | 126922 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_3168 | RahmanSF_2018_SRR5963280_bin.12_k141_3168_113 | 126923 | 128035 | + | 2.A.103.1.3 |
| CAZyme | RahmanSF_2018_SRR5963280_bin.12_k141_3168 | RahmanSF_2018_SRR5963280_bin.12_k141_3168_114 | 128032 | 129111 | + | GT28 |
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_3168_111
Type: TC
Location: 124643 - 125593 (+)
Type: TC
Location: 124643 - 125593 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_3168_112
Type: pfam
Location: 125603 - 126922 (+)
Type: pfam
Location: 125603 - 126922 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_3168_113
Type: TC
Location: 126923 - 128035 (+)
Type: TC
Location: 126923 - 128035 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_3168_114
Type: CAZyme
Location: 128032 - 129111 (+)
Type: CAZyme
Location: 128032 - 129111 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_A
Species
Peptoniphilus_A gorbachii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.