Cluster: RahmanSF_2018_SRR5963280_bin.12_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963280_bin.12
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963280_bin.12_k141_657 | RahmanSF_2018_SRR5963280_bin.12_k141_657_23 | 19523 | 20659 | + | GT4 |
| pfam | RahmanSF_2018_SRR5963280_bin.12_k141_657 | RahmanSF_2018_SRR5963280_bin.12_k141_657_24 | 20646 | 21134 | + | DUF4330 |
| NULL(UNKNOWN) | RahmanSF_2018_SRR5963280_bin.12_k141_657 | RahmanSF_2018_SRR5963280_bin.12_k141_657_25 | 21135 | 21683 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | RahmanSF_2018_SRR5963280_bin.12_k141_657 | RahmanSF_2018_SRR5963280_bin.12_k141_657_26 | 21677 | 23062 | + | 9.B.67.1.1 |
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_657_23
Type: CAZyme
Location: 19523 - 20659 (+)
Type: CAZyme
Location: 19523 - 20659 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_657_24
Type: pfam
Location: 20646 - 21134 (+)
Type: pfam
Location: 20646 - 21134 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_657_25
Type:
Location: 21135 - 21683 (+)
Type:
Location: 21135 - 21683 (+)
Gene ID: RahmanSF_2018_SRR5963280_bin.12_k141_657_26
Type: TC
Location: 21677 - 23062 (+)
Type: TC
Location: 21677 - 23062 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Peptoniphilus_A
Species
Peptoniphilus_A gorbachii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.