Cluster: RahmanSF_2018_SRR5963239_bin.10_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963239_bin.10
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_4238 | RahmanSF_2018_SRR5963239_bin.10_k141_4238_32 | 27171 | 28184 | - | GT4 |
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_4238 | RahmanSF_2018_SRR5963239_bin.10_k141_4238_33 | 28153 | 29310 | - | GT4 |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_4238 | RahmanSF_2018_SRR5963239_bin.10_k141_4238_34 | 29413 | 29763 | + | SdpI |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_4238 | RahmanSF_2018_SRR5963239_bin.10_k141_4238_35 | 29808 | 30284 | - | 4.A.6.1.21 |
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4238_32
Type: CAZyme
Location: 27171 - 28184 (-)
Type: CAZyme
Location: 27171 - 28184 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4238_33
Type: CAZyme
Location: 28153 - 29310 (-)
Type: CAZyme
Location: 28153 - 29310 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4238_34
Type: pfam
Location: 29413 - 29763 (+)
Type: pfam
Location: 29413 - 29763 (+)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4238_35
Type: TC
Location: 29808 - 30284 (-)
Type: TC
Location: 29808 - 30284 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp027669155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.