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Cluster: RahmanSF_2018_SRR5963239_bin.10_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_79 96921 97583 - 3.A.1.124.6
pfam RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_80 97712 98689 - DUF1002
TC RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_81 98698 99507 - 3.A.1.132.3
TC RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_82 99627 100628 - 9.A.23.1.1
TF RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_83 100805 101305 - HTH_11
TC RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_84 101668 103233 + 3.A.1.3.20
TC RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_85 103226 103966 + 3.A.1.3.20
pfam RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_86 104086 104838 + Fic
TC RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_87 104871 106064 - 2.A.36.2.1
pfam RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_88 106182 106766 - RNase_H | Cauli_VI
CAZyme RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_89 106763 108214 - GH13_5
pfam RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_90 108217 108855 - DeoC
STP RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_91 108855 109946 - SpoIIE
TC RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_92 110069 111508 - 4.A.1.2.7
STP RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_93 111510 112385 - SIS
CAZyme RahmanSF_2018_SRR5963239_bin.10_k141_2110 RahmanSF_2018_SRR5963239_bin.10_k141_2110_94 112366 113355 - GH170
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_79
Type: TC
Location: 96921 - 97583 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_80
Type: pfam
Location: 97712 - 98689 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_81
Type: TC
Location: 98698 - 99507 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_82
Type: TC
Location: 99627 - 100628 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_83
Type: TF
Location: 100805 - 101305 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_84
Type: TC
Location: 101668 - 103233 (+)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_85
Type: TC
Location: 103226 - 103966 (+)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_86
Type: pfam
Location: 104086 - 104838 (+)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_87
Type: TC
Location: 104871 - 106064 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_88
Type: pfam
Location: 106182 - 106766 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_89
Type: CAZyme
Location: 106763 - 108214 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_90
Type: pfam
Location: 108217 - 108855 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_91
Type: STP
Location: 108855 - 109946 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_92
Type: TC
Location: 110069 - 111508 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_93
Type: STP
Location: 111510 - 112385 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_2110_94
Type: CAZyme
Location: 112366 - 113355 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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