Cluster: RahmanSF_2018_SRR5963239_bin.10_CGC3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963239_bin.10
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_1529 | RahmanSF_2018_SRR5963239_bin.10_k141_1529_174 | 171526 | 172794 | - | 2.A.103.1.7 |
| STP | RahmanSF_2018_SRR5963239_bin.10_k141_1529 | RahmanSF_2018_SRR5963239_bin.10_k141_1529_175 | 172787 | 173290 | - | FHA |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_1529 | RahmanSF_2018_SRR5963239_bin.10_k141_1529_176 | 173473 | 175167 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_1529 | RahmanSF_2018_SRR5963239_bin.10_k141_1529_177 | 175157 | 177079 | - | GH13_14 |
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_1529 | RahmanSF_2018_SRR5963239_bin.10_k141_1529_178 | 177051 | 179330 | - | GT35 |
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_1529 | RahmanSF_2018_SRR5963239_bin.10_k141_1529_179 | 179311 | 180744 | - | GT5 |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_1529 | RahmanSF_2018_SRR5963239_bin.10_k141_1529_180 | 180746 | 181870 | - | Hexapep_GlmU |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_1529 | RahmanSF_2018_SRR5963239_bin.10_k141_1529_181 | 181872 | 183005 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_1529 | RahmanSF_2018_SRR5963239_bin.10_k141_1529_182 | 183831 | 185225 | - | GH32 |
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1529_174
Type: TC
Location: 171526 - 172794 (-)
Type: TC
Location: 171526 - 172794 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1529_175
Type: STP
Location: 172787 - 173290 (-)
Type: STP
Location: 172787 - 173290 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1529_176
Type: pfam
Location: 173473 - 175167 (-)
Type: pfam
Location: 173473 - 175167 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1529_177
Type: CAZyme
Location: 175157 - 177079 (-)
Type: CAZyme
Location: 175157 - 177079 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1529_178
Type: CAZyme
Location: 177051 - 179330 (-)
Type: CAZyme
Location: 177051 - 179330 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1529_179
Type: CAZyme
Location: 179311 - 180744 (-)
Type: CAZyme
Location: 179311 - 180744 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1529_180
Type: pfam
Location: 180746 - 181870 (-)
Type: pfam
Location: 180746 - 181870 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1529_181
Type: pfam
Location: 181872 - 183005 (-)
Type: pfam
Location: 181872 - 183005 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1529_182
Type: CAZyme
Location: 183831 - 185225 (-)
Type: CAZyme
Location: 183831 - 185225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp027669155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.