Cluster: RahmanSF_2018_SRR5963239_bin.10_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963239_bin.10
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_8821 | RahmanSF_2018_SRR5963239_bin.10_k141_8821_2 | 360 | 1211 | - | 1.A.23.3.1 |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_8821 | RahmanSF_2018_SRR5963239_bin.10_k141_8821_3 | 1204 | 1725 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_8821 | RahmanSF_2018_SRR5963239_bin.10_k141_8821_4 | 1722 | 3710 | - | GH13_8 |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_8821 | RahmanSF_2018_SRR5963239_bin.10_k141_8821_5 | 3739 | 5787 | - | GTP_EFTU | EFG_C | MMR_HSR1 | GTP_EFTU_D2 | EFG_IV | EFG_III | EF-G_D2 |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_8821 | RahmanSF_2018_SRR5963239_bin.10_k141_8821_6 | 5946 | 6293 | - | DUF956 |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_8821 | RahmanSF_2018_SRR5963239_bin.10_k141_8821_7 | 6293 | 7231 | - | 4.A.6.1.15 |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_8821 | RahmanSF_2018_SRR5963239_bin.10_k141_8821_8 | 7244 | 8059 | - | 4.A.6.1.15 |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_8821 | RahmanSF_2018_SRR5963239_bin.10_k141_8821_9 | 8071 | 9060 | - | 4.A.6.1.15 |
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_8821_2
Type: TC
Location: 360 - 1211 (-)
Type: TC
Location: 360 - 1211 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_8821_3
Type: pfam
Location: 1204 - 1725 (-)
Type: pfam
Location: 1204 - 1725 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_8821_4
Type: CAZyme
Location: 1722 - 3710 (-)
Type: CAZyme
Location: 1722 - 3710 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_8821_5
Type: pfam
Location: 3739 - 5787 (-)
Type: pfam
Location: 3739 - 5787 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_8821_6
Type: pfam
Location: 5946 - 6293 (-)
Type: pfam
Location: 5946 - 6293 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_8821_7
Type: TC
Location: 6293 - 7231 (-)
Type: TC
Location: 6293 - 7231 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_8821_8
Type: TC
Location: 7244 - 8059 (-)
Type: TC
Location: 7244 - 8059 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_8821_9
Type: TC
Location: 8071 - 9060 (-)
Type: TC
Location: 8071 - 9060 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp027669155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.