Cluster: RahmanSF_2018_SRR5963239_bin.10_CGC2
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963239_bin.10
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_106 | 103718 | 104728 | - | 1.A.33.1.5 |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_107 | 104741 | 105427 | - | RadC | UPF0758_N |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_108 | 105405 | 105938 | - | 2.A.87.3.3 |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_109 | 105935 | 106327 | - | NusG_II |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_110 | 106418 | 107221 | - | 3.D.6.1.2 |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_111 | 107231 | 107806 | - | 3.D.6.1.2 |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_112 | 107820 | 108467 | - | 3.D.6.1.2 |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_113 | 108476 | 109021 | - | FMN_bind |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_114 | 109014 | 109991 | - | 3.D.6.1.2 |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_115 | 110001 | 111320 | - | 3.D.6.1.2 |
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_116 | 111389 | 112045 | - | GH23 |
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_106
Type: TC
Location: 103718 - 104728 (-)
Type: TC
Location: 103718 - 104728 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_107
Type: pfam
Location: 104741 - 105427 (-)
Type: pfam
Location: 104741 - 105427 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_108
Type: TC
Location: 105405 - 105938 (-)
Type: TC
Location: 105405 - 105938 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_109
Type: pfam
Location: 105935 - 106327 (-)
Type: pfam
Location: 105935 - 106327 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_110
Type: TC
Location: 106418 - 107221 (-)
Type: TC
Location: 106418 - 107221 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_111
Type: TC
Location: 107231 - 107806 (-)
Type: TC
Location: 107231 - 107806 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_112
Type: TC
Location: 107820 - 108467 (-)
Type: TC
Location: 107820 - 108467 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_113
Type: pfam
Location: 108476 - 109021 (-)
Type: pfam
Location: 108476 - 109021 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_114
Type: TC
Location: 109014 - 109991 (-)
Type: TC
Location: 109014 - 109991 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_115
Type: TC
Location: 110001 - 111320 (-)
Type: TC
Location: 110001 - 111320 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_116
Type: CAZyme
Location: 111389 - 112045 (-)
Type: CAZyme
Location: 111389 - 112045 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp027669155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.