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Cluster: RahmanSF_2018_SRR5963239_bin.10_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_105 114614 116494 - 2.A.67.4.2
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_106 116695 118026 - 9.A.40.2.2
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_107 118108 119694 - 2.A.35.2.1
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_108 119852 120490 - 3.A.2.2.2
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_109 120500 121867 - 3.A.2.2.2
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_110 121867 123624 - 3.A.2.2.2
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_111 123636 123947 - 3.A.2.2.2
pfam RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_112 123940 125004 - vATP-synt_AC39
pfam RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_113 125014 125565 - vATP-synt_E
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_114 125581 126051 - 3.A.2.2.2
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_115 126044 127984 - 3.A.2.2.2
NULL(UNKNOWN) RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_116 127971 128294 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_117 128399 129559 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_118 129570 130661 + GT4
TC RahmanSF_2018_SRR5963239_bin.10_k141_4330 RahmanSF_2018_SRR5963239_bin.10_k141_4330_119 130780 132156 + 2.A.25.1.3
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_105
Type: TC
Location: 114614 - 116494 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_106
Type: TC
Location: 116695 - 118026 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_107
Type: TC
Location: 118108 - 119694 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_108
Type: TC
Location: 119852 - 120490 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_109
Type: TC
Location: 120500 - 121867 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_110
Type: TC
Location: 121867 - 123624 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_111
Type: TC
Location: 123636 - 123947 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_112
Type: pfam
Location: 123940 - 125004 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_113
Type: pfam
Location: 125014 - 125565 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_114
Type: TC
Location: 125581 - 126051 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_115
Type: TC
Location: 126044 - 127984 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_116
Type:
Location: 127971 - 128294 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_117
Type:
Location: 128399 - 129559 (+)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_118
Type: CAZyme
Location: 129570 - 130661 (+)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_4330_119
Type: TC
Location: 130780 - 132156 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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