Cluster: RahmanSF_2018_SRR5963239_bin.10_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: RahmanSF_2018_SRR5963239_bin.10
- CGC Family ID: CGCFAM_01259
- Continent: North America
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_13 | 11968 | 13068 | - | GT4 |
| pfam | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_14 | 13434 | 14534 | - | Epimerase_2 |
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_15 | 14531 | 15592 | - | GT4 |
| CAZyme | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_16 | 15589 | 16368 | - | GT26 |
| TC | RahmanSF_2018_SRR5963239_bin.10_k141_1400 | RahmanSF_2018_SRR5963239_bin.10_k141_1400_17 | 16417 | 17868 | - | 9.B.18.1.2 |
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_13
Type: CAZyme
Location: 11968 - 13068 (-)
Type: CAZyme
Location: 11968 - 13068 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_14
Type: pfam
Location: 13434 - 14534 (-)
Type: pfam
Location: 13434 - 14534 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_15
Type: CAZyme
Location: 14531 - 15592 (-)
Type: CAZyme
Location: 14531 - 15592 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_16
Type: CAZyme
Location: 15589 - 16368 (-)
Type: CAZyme
Location: 15589 - 16368 (-)
Gene ID: RahmanSF_2018_SRR5963239_bin.10_k141_1400_17
Type: TC
Location: 16417 - 17868 (-)
Type: TC
Location: 16417 - 17868 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus sp027669155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.