Cluster: PUL0794_Rep_461_C0
🧬 Cluster Details
- Gene Count: 22
- CAZyme Count: 7
- Substrate: arabinogalactan
- Genome ID: Rep_461
- CGC Family ID: CGCFAM_00723
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0794_Rep_461_C0 | Rep_461_c_10_23 | 32372 | 33352 | - | GH43_29 |
| CAZyme | PUL0794_Rep_461_C0 | Rep_461_c_10_24 | 33358 | 35292 | - | GH51_2 |
| CAZyme | PUL0794_Rep_461_C0 | Rep_461_c_10_25 | 35367 | 36854 | - | GH43_4 |
| TF | PUL0794_Rep_461_C0 | Rep_461_c_10_26 | 36968 | 41287 | + | HTH_AraC | HTH_AraC |
| pfam | PUL0794_Rep_461_C0 | Rep_461_c_10_27 | 41654 | 43498 | + | Laminin_G_3 |
| TC | PUL0794_Rep_461_C0 | Rep_461_c_10_28 | 43525 | 46638 | + | 1.B.14.6.1 |
| pfam | PUL0794_Rep_461_C0 | Rep_461_c_10_29 | 46643 | 48397 | + | SusD_RagB | SusD-like_3 |
| TC | PUL0794_Rep_461_C0 | Rep_461_c_10_30 | 48419 | 51628 | + | 1.B.14.6.2 |
| pfam | PUL0794_Rep_461_C0 | Rep_461_c_10_31 | 51647 | 53428 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | PUL0794_Rep_461_C0 | Rep_461_c_10_32 | 53458 | 53904 | + | NULL(UNKNOWN) |
| CAZyme | PUL0794_Rep_461_C0 | Rep_461_c_10_33 | 54006 | 55919 | + | GH43_4 |
| sulfatase | PUL0794_Rep_461_C0 | Rep_461_c_10_34 | 56196 | 57335 | + | S1_22 |
| TC | PUL0794_Rep_461_C0 | Rep_461_c_10_35 | 57361 | 59055 | + | 2.A.21.3.19 |
| STP | PUL0794_Rep_461_C0 | Rep_461_c_10_36 | 59158 | 59835 | + | NUDIX |
| pfam | PUL0794_Rep_461_C0 | Rep_461_c_10_37 | 59951 | 60634 | + | Aldolase_II |
| pfam | PUL0794_Rep_461_C0 | Rep_461_c_10_38 | 60677 | 62185 | + | AraA_N | Arabinose_Iso_C | AraA_central |
| pfam | PUL0794_Rep_461_C0 | Rep_461_c_10_39 | 62188 | 63786 | + | FGGY_N | FGGY_C |
| CAZyme | PUL0794_Rep_461_C0 | Rep_461_c_10_40 | 64068 | 66437 | + | GH146 |
| CAZyme | PUL0794_Rep_461_C0 | Rep_461_c_10_41 | 66472 | 68016 | + | GH51_1 |
| pfam | PUL0794_Rep_461_C0 | Rep_461_c_10_43 | 68192 | 70201 | + | Transketolase_N | Transket_pyr | Transketolase_C_1 |
| pfam | PUL0794_Rep_461_C0 | Rep_461_c_10_44 | 70306 | 70740 | + | LacAB_rpiB |
| CAZyme | PUL0794_Rep_461_C0 | Rep_461_c_10_47 | 72019 | 73422 | + | GH28 |
Gene ID: Rep_461_c_10_23
Type: CAZyme
Location: 32372 - 33352 (-)
Type: CAZyme
Location: 32372 - 33352 (-)
Gene ID: Rep_461_c_10_24
Type: CAZyme
Location: 33358 - 35292 (-)
Type: CAZyme
Location: 33358 - 35292 (-)
Gene ID: Rep_461_c_10_25
Type: CAZyme
Location: 35367 - 36854 (-)
Type: CAZyme
Location: 35367 - 36854 (-)
Gene ID: Rep_461_c_10_26
Type: TF
Location: 36968 - 41287 (+)
Type: TF
Location: 36968 - 41287 (+)
Gene ID: Rep_461_c_10_27
Type: pfam
Location: 41654 - 43498 (+)
Type: pfam
Location: 41654 - 43498 (+)
Gene ID: Rep_461_c_10_28
Type: TC
Location: 43525 - 46638 (+)
Type: TC
Location: 43525 - 46638 (+)
Gene ID: Rep_461_c_10_29
Type: pfam
Location: 46643 - 48397 (+)
Type: pfam
Location: 46643 - 48397 (+)
Gene ID: Rep_461_c_10_30
Type: TC
Location: 48419 - 51628 (+)
Type: TC
Location: 48419 - 51628 (+)
Gene ID: Rep_461_c_10_31
Type: pfam
Location: 51647 - 53428 (+)
Type: pfam
Location: 51647 - 53428 (+)
Gene ID: Rep_461_c_10_32
Type: null
Location: 53458 - 53904 (+)
Type: null
Location: 53458 - 53904 (+)
Gene ID: Rep_461_c_10_33
Type: CAZyme
Location: 54006 - 55919 (+)
Type: CAZyme
Location: 54006 - 55919 (+)
Gene ID: Rep_461_c_10_34
Type: sulfatase
Location: 56196 - 57335 (+)
Type: sulfatase
Location: 56196 - 57335 (+)
Gene ID: Rep_461_c_10_35
Type: TC
Location: 57361 - 59055 (+)
Type: TC
Location: 57361 - 59055 (+)
Gene ID: Rep_461_c_10_36
Type: STP
Location: 59158 - 59835 (+)
Type: STP
Location: 59158 - 59835 (+)
Gene ID: Rep_461_c_10_37
Type: pfam
Location: 59951 - 60634 (+)
Type: pfam
Location: 59951 - 60634 (+)
Gene ID: Rep_461_c_10_38
Type: pfam
Location: 60677 - 62185 (+)
Type: pfam
Location: 60677 - 62185 (+)
Gene ID: Rep_461_c_10_39
Type: pfam
Location: 62188 - 63786 (+)
Type: pfam
Location: 62188 - 63786 (+)
Gene ID: Rep_461_c_10_40
Type: CAZyme
Location: 64068 - 66437 (+)
Type: CAZyme
Location: 64068 - 66437 (+)
Gene ID: Rep_461_c_10_41
Type: CAZyme
Location: 66472 - 68016 (+)
Type: CAZyme
Location: 66472 - 68016 (+)
Gene ID: Rep_461_c_10_43
Type: pfam
Location: 68192 - 70201 (+)
Type: pfam
Location: 68192 - 70201 (+)
Gene ID: Rep_461_c_10_44
Type: pfam
Location: 70306 - 70740 (+)
Type: pfam
Location: 70306 - 70740 (+)
Gene ID: Rep_461_c_10_47
Type: CAZyme
Location: 72019 - 73422 (+)
Type: CAZyme
Location: 72019 - 73422 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp905207245
Gene Composition
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