Cluster: PUL0792
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate: xylan
- Genome ID: PUL0792
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | NZ_CP079235 | KYE73_RS02290 | 1 | 426 | - | Pep_deformylase |
| pfam | NZ_CP079235 | KYE73_RS02295 | 518 | 1084 | + | dCMP_cyt_deam_1 | MafB19-deam |
| TC | NZ_CP079235 | KYE73_RS02300 | 1320 | 2627 | + | 3.A.1.1.21 |
| TC | NZ_CP079235 | KYE73_RS02305 | 2647 | 3600 | + | 3.A.1.1.21 |
| TC | NZ_CP079235 | KYE73_RS02310 | 3600 | 4466 | + | 3.A.1.1.28 |
| CAZyme | NZ_CP079235 | KYE73_RS02315 | 4580 | 6574 | + | GH120 |
| CAZyme | NZ_CP079235 | KYE73_RS02320 | 6579 | 8207 | + | CBM91 | GH43_11 |
| NULL(UNKNOWN) | NZ_CP079235 | KYE73_RS02325 | 8341 | 10188 | + | NULL(UNKNOWN) |
| CAZyme | NZ_CP079235 | KYE73_RS02330 | 10434 | 11567 | + | GH8 |
| CAZyme | NZ_CP079235 | KYE73_RS02335 | 11780 | 14254 | + | CBM9 | GH10 |
| pfam | NZ_CP079235 | KYE73_RS02340 | 14568 | 15842 | + | rve |
| CAZyme | NZ_CP079235 | KYE73_RS02345 | 16462 | 17838 | + | CE20 |
| NULL(UNKNOWN) | NZ_CP079235 | KYE73_RS09455 | 18828 | 19067 | + | NULL(UNKNOWN) |
| pfam | NZ_CP079235 | KYE73_RS02355 | 19647 | 20543 | - | IU_nuc_hydro |
| TF | NZ_CP079235 | KYE73_RS02365 | 22335 | 23561 | + | MarR |
Gene ID: KYE73_RS02290
Type: pfam
Location: 1 - 426 (-)
Type: pfam
Location: 1 - 426 (-)
Gene ID: KYE73_RS02295
Type: pfam
Location: 518 - 1084 (+)
Type: pfam
Location: 518 - 1084 (+)
Gene ID: KYE73_RS02300
Type: TC
Location: 1320 - 2627 (+)
Type: TC
Location: 1320 - 2627 (+)
Gene ID: KYE73_RS02305
Type: TC
Location: 2647 - 3600 (+)
Type: TC
Location: 2647 - 3600 (+)
Gene ID: KYE73_RS02310
Type: TC
Location: 3600 - 4466 (+)
Type: TC
Location: 3600 - 4466 (+)
Gene ID: KYE73_RS02315
Type: CAZyme
Location: 4580 - 6574 (+)
Type: CAZyme
Location: 4580 - 6574 (+)
Gene ID: KYE73_RS02320
Type: CAZyme
Location: 6579 - 8207 (+)
Type: CAZyme
Location: 6579 - 8207 (+)
Gene ID: KYE73_RS02325
Type: null
Location: 8341 - 10188 (+)
Type: null
Location: 8341 - 10188 (+)
Gene ID: KYE73_RS02330
Type: CAZyme
Location: 10434 - 11567 (+)
Type: CAZyme
Location: 10434 - 11567 (+)
Gene ID: KYE73_RS02335
Type: CAZyme
Location: 11780 - 14254 (+)
Type: CAZyme
Location: 11780 - 14254 (+)
Gene ID: KYE73_RS02340
Type: pfam
Location: 14568 - 15842 (+)
Type: pfam
Location: 14568 - 15842 (+)
Gene ID: KYE73_RS02345
Type: CAZyme
Location: 16462 - 17838 (+)
Type: CAZyme
Location: 16462 - 17838 (+)
Gene ID: KYE73_RS09455
Type: null
Location: 18828 - 19067 (+)
Type: null
Location: 18828 - 19067 (+)
Gene ID: KYE73_RS02355
Type: pfam
Location: 19647 - 20543 (-)
Type: pfam
Location: 19647 - 20543 (-)
Gene ID: KYE73_RS02365
Type: TF
Location: 22335 - 23561 (+)
Type: TF
Location: 22335 - 23561 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Gene Composition
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