Cluster: PUL0789_HRGMv2_0156_C1
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: HRGMv2_0156
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0789_HRGMv2_0156_C1 | HRGMv2_0156_1_1510 | 1784312 | 1786351 | - | TIG | TIG | TIG | DUF5013 |
| pfam | PUL0789_HRGMv2_0156_C1 | HRGMv2_0156_1_1511 | 1786401 | 1787594 | - | TIG | TIG | DUF5013 |
| pfam | PUL0789_HRGMv2_0156_C1 | HRGMv2_0156_1_1512 | 1787631 | 1789427 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0789_HRGMv2_0156_C1 | HRGMv2_0156_1_1513 | 1789461 | 1792709 | - | 1.B.14.6.1 |
| STP | PUL0789_HRGMv2_0156_C1 | HRGMv2_0156_1_1514 | 1792759 | 1793289 | - | Sigma70_r2 | Sigma70_r4_2 |
| NULL(UNKNOWN) | PUL0789_HRGMv2_0156_C1 | HRGMv2_0156_1_1515 | 1793527 | 1793901 | - | NULL(UNKNOWN) |
| TF | PUL0789_HRGMv2_0156_C1 | HRGMv2_0156_1_1516 | 1794016 | 1798092 | - | HTH_AraC |
| CAZyme | PUL0789_HRGMv2_0156_C1 | HRGMv2_0156_1_1517 | 1798152 | 1800065 | - | CBM6 |
| CAZyme | PUL0789_HRGMv2_0156_C1 | HRGMv2_0156_1_1518 | 1800513 | 1801925 | - | GH28 |
Gene ID: HRGMv2_0156_1_1510
Type: pfam
Location: 1784312 - 1786351 (-)
Type: pfam
Location: 1784312 - 1786351 (-)
Gene ID: HRGMv2_0156_1_1511
Type: pfam
Location: 1786401 - 1787594 (-)
Type: pfam
Location: 1786401 - 1787594 (-)
Gene ID: HRGMv2_0156_1_1512
Type: pfam
Location: 1787631 - 1789427 (-)
Type: pfam
Location: 1787631 - 1789427 (-)
Gene ID: HRGMv2_0156_1_1513
Type: TC
Location: 1789461 - 1792709 (-)
Type: TC
Location: 1789461 - 1792709 (-)
Gene ID: HRGMv2_0156_1_1514
Type: STP
Location: 1792759 - 1793289 (-)
Type: STP
Location: 1792759 - 1793289 (-)
Gene ID: HRGMv2_0156_1_1515
Type: null
Location: 1793527 - 1793901 (-)
Type: null
Location: 1793527 - 1793901 (-)
Gene ID: HRGMv2_0156_1_1516
Type: TF
Location: 1794016 - 1798092 (-)
Type: TF
Location: 1794016 - 1798092 (-)
Gene ID: HRGMv2_0156_1_1517
Type: CAZyme
Location: 1798152 - 1800065 (-)
Type: CAZyme
Location: 1798152 - 1800065 (-)
Gene ID: HRGMv2_0156_1_1518
Type: CAZyme
Location: 1800513 - 1801925 (-)
Type: CAZyme
Location: 1800513 - 1801925 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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