Cluster: PUL0789
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate: pectin
- Genome ID: PUL0789
- CGC Family ID: CGCFAM_02269
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_CP012938 | Bovatus_RS24435 | 1 | 1413 | + | GH28 |
| CAZyme | NZ_CP012938 | Bovatus_RS24440 | 1861 | 3774 | + | CBM6 |
| TF | NZ_CP012938 | Bovatus_RS24445 | 3834 | 7910 | + | HTH_AraC |
| NULL(UNKNOWN) | NZ_CP012938 | Bovatus_RS24450 | 8025 | 8399 | + | NULL(UNKNOWN) |
| STP | NZ_CP012938 | Bovatus_RS24455 | 8637 | 9167 | + | Sigma70_r2 | Sigma70_r4_2 |
| TC | NZ_CP012938 | Bovatus_RS24460 | 9221 | 12469 | + | 1.B.14.6.1 |
| pfam | NZ_CP012938 | Bovatus_RS24465 | 12503 | 14299 | + | SusD_RagB | SusD-like_3 |
| pfam | NZ_CP012938 | Bovatus_RS24470 | 14336 | 15529 | + | TIG | TIG | DUF5013 |
| pfam | NZ_CP012938 | Bovatus_RS24475 | 15579 | 17618 | + | TIG | TIG | TIG | DUF5013 |
Gene ID: Bovatus_RS24435
Type: CAZyme
Location: 1 - 1413 (+)
Type: CAZyme
Location: 1 - 1413 (+)
Gene ID: Bovatus_RS24440
Type: CAZyme
Location: 1861 - 3774 (+)
Type: CAZyme
Location: 1861 - 3774 (+)
Gene ID: Bovatus_RS24445
Type: TF
Location: 3834 - 7910 (+)
Type: TF
Location: 3834 - 7910 (+)
Gene ID: Bovatus_RS24450
Type: null
Location: 8025 - 8399 (+)
Type: null
Location: 8025 - 8399 (+)
Gene ID: Bovatus_RS24455
Type: STP
Location: 8637 - 9167 (+)
Type: STP
Location: 8637 - 9167 (+)
Gene ID: Bovatus_RS24460
Type: TC
Location: 9221 - 12469 (+)
Type: TC
Location: 9221 - 12469 (+)
Gene ID: Bovatus_RS24465
Type: pfam
Location: 12503 - 14299 (+)
Type: pfam
Location: 12503 - 14299 (+)
Gene ID: Bovatus_RS24470
Type: pfam
Location: 14336 - 15529 (+)
Type: pfam
Location: 14336 - 15529 (+)
Gene ID: Bovatus_RS24475
Type: pfam
Location: 15579 - 17618 (+)
Type: pfam
Location: 15579 - 17618 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides ovatus
Gene Composition
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