Cluster: PUL0787_A43.bin_3_C0
🧬 Cluster Details
- Gene Count: 27
- CAZyme Count: 14
- Substrate: pectin
- Genome ID: A43.bin_3
- CGC Family ID: CGCFAM_00927
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0787_A43.bin_3_C0 | A43_contig_103_641 | 764383 | 768675 | - | HTH_AraC | HTH_AraC |
| pfam | PUL0787_A43.bin_3_C0 | A43_contig_103_643 | 768901 | 769215 | - | rhaM |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_644 | 769235 | 770644 | - | GH105 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_645 | 770648 | 772489 | - | PL11_1 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_646 | 772734 | 773873 | + | GH105 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_647 | 774093 | 775637 | + | CE12 | CE12 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_648 | 775956 | 779333 | - | PL26 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_649 | 779536 | 781620 | - | PL11_1 |
| pfam | PUL0787_A43.bin_3_C0 | A43_contig_103_650 | 781701 | 783422 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0787_A43.bin_3_C0 | A43_contig_103_651 | 783444 | 786503 | - | 1.B.14.6.1 |
| pfam | PUL0787_A43.bin_3_C0 | A43_contig_103_652 | 786541 | 788553 | - | SusD_RagB | SusD-like_3 |
| TC | PUL0787_A43.bin_3_C0 | A43_contig_103_653 | 788575 | 791754 | - | 1.B.14.6.1 |
| pfam | PUL0787_A43.bin_3_C0 | A43_contig_103_654 | 791814 | 793439 | - | Mfa_like_1 |
| pfam | PUL0787_A43.bin_3_C0 | A43_contig_103_655 | 793485 | 794522 | - | Mfa_like_1 |
| pfam | PUL0787_A43.bin_3_C0 | A43_contig_103_656 | 794966 | 796144 | - | Phage_int_SAM_5 | Arm-DNA-bind_5 |
| TC | PUL0787_A43.bin_3_C0 | A43_contig_103_657 | 796579 | 799710 | + | 1.B.14.6.1 |
| pfam | PUL0787_A43.bin_3_C0 | A43_contig_103_658 | 799735 | 801816 | + | SusD_RagB | SusD-like_3 |
| pfam | PUL0787_A43.bin_3_C0 | A43_contig_103_659 | 801909 | 802598 | - | Lipase_GDSL_2 | Lipase_GDSL_lke |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_660 | 802687 | 804069 | - | GH28 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_661 | 804132 | 806219 | - | GH42 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_662 | 806550 | 808886 | - | CBM32 | GH43_18 | GH43_34 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_663 | 808980 | 812027 | + | GH2 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_664 | 812158 | 813396 | + | CE12 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_665 | 813452 | 814987 | + | GH28 |
| pfam | PUL0787_A43.bin_3_C0 | A43_contig_103_666 | 814938 | 815540 | + | DUF4450 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_667 | 815537 | 816940 | + | GH28 |
| CAZyme | PUL0787_A43.bin_3_C0 | A43_contig_103_668 | 816940 | 819750 | + | GH106 |
Gene ID: A43_contig_103_641
Type: TF
Location: 764383 - 768675 (-)
Type: TF
Location: 764383 - 768675 (-)
Gene ID: A43_contig_103_643
Type: pfam
Location: 768901 - 769215 (-)
Type: pfam
Location: 768901 - 769215 (-)
Gene ID: A43_contig_103_644
Type: CAZyme
Location: 769235 - 770644 (-)
Type: CAZyme
Location: 769235 - 770644 (-)
Gene ID: A43_contig_103_645
Type: CAZyme
Location: 770648 - 772489 (-)
Type: CAZyme
Location: 770648 - 772489 (-)
Gene ID: A43_contig_103_646
Type: CAZyme
Location: 772734 - 773873 (+)
Type: CAZyme
Location: 772734 - 773873 (+)
Gene ID: A43_contig_103_647
Type: CAZyme
Location: 774093 - 775637 (+)
Type: CAZyme
Location: 774093 - 775637 (+)
Gene ID: A43_contig_103_648
Type: CAZyme
Location: 775956 - 779333 (-)
Type: CAZyme
Location: 775956 - 779333 (-)
Gene ID: A43_contig_103_649
Type: CAZyme
Location: 779536 - 781620 (-)
Type: CAZyme
Location: 779536 - 781620 (-)
Gene ID: A43_contig_103_650
Type: pfam
Location: 781701 - 783422 (-)
Type: pfam
Location: 781701 - 783422 (-)
Gene ID: A43_contig_103_651
Type: TC
Location: 783444 - 786503 (-)
Type: TC
Location: 783444 - 786503 (-)
Gene ID: A43_contig_103_652
Type: pfam
Location: 786541 - 788553 (-)
Type: pfam
Location: 786541 - 788553 (-)
Gene ID: A43_contig_103_653
Type: TC
Location: 788575 - 791754 (-)
Type: TC
Location: 788575 - 791754 (-)
Gene ID: A43_contig_103_654
Type: pfam
Location: 791814 - 793439 (-)
Type: pfam
Location: 791814 - 793439 (-)
Gene ID: A43_contig_103_655
Type: pfam
Location: 793485 - 794522 (-)
Type: pfam
Location: 793485 - 794522 (-)
Gene ID: A43_contig_103_656
Type: pfam
Location: 794966 - 796144 (-)
Type: pfam
Location: 794966 - 796144 (-)
Gene ID: A43_contig_103_657
Type: TC
Location: 796579 - 799710 (+)
Type: TC
Location: 796579 - 799710 (+)
Gene ID: A43_contig_103_658
Type: pfam
Location: 799735 - 801816 (+)
Type: pfam
Location: 799735 - 801816 (+)
Gene ID: A43_contig_103_659
Type: pfam
Location: 801909 - 802598 (-)
Type: pfam
Location: 801909 - 802598 (-)
Gene ID: A43_contig_103_660
Type: CAZyme
Location: 802687 - 804069 (-)
Type: CAZyme
Location: 802687 - 804069 (-)
Gene ID: A43_contig_103_661
Type: CAZyme
Location: 804132 - 806219 (-)
Type: CAZyme
Location: 804132 - 806219 (-)
Gene ID: A43_contig_103_662
Type: CAZyme
Location: 806550 - 808886 (-)
Type: CAZyme
Location: 806550 - 808886 (-)
Gene ID: A43_contig_103_663
Type: CAZyme
Location: 808980 - 812027 (+)
Type: CAZyme
Location: 808980 - 812027 (+)
Gene ID: A43_contig_103_664
Type: CAZyme
Location: 812158 - 813396 (+)
Type: CAZyme
Location: 812158 - 813396 (+)
Gene ID: A43_contig_103_665
Type: CAZyme
Location: 813452 - 814987 (+)
Type: CAZyme
Location: 813452 - 814987 (+)
Gene ID: A43_contig_103_666
Type: pfam
Location: 814938 - 815540 (+)
Type: pfam
Location: 814938 - 815540 (+)
Gene ID: A43_contig_103_667
Type: CAZyme
Location: 815537 - 816940 (+)
Type: CAZyme
Location: 815537 - 816940 (+)
Gene ID: A43_contig_103_668
Type: CAZyme
Location: 816940 - 819750 (+)
Type: CAZyme
Location: 816940 - 819750 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides xylanisolvens
Gene Composition
Loading chart...
← Back to Cluster List