Cluster: PUL0770_HRGMv2_0215_C3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: HRGMv2_0215
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| sulfatase | PUL0770_HRGMv2_0215_C3 | HRGMv2_0215_82_29 | 41793 | 42980 | + | S1_4 |
| TC | PUL0770_HRGMv2_0215_C3 | HRGMv2_0215_82_31 | 43133 | 44857 | + | 2.A.21.3.19 |
| STP | PUL0770_HRGMv2_0215_C3 | HRGMv2_0215_82_32 | 45017 | 45697 | + | NUDIX |
| pfam | PUL0770_HRGMv2_0215_C3 | HRGMv2_0215_82_33 | 45765 | 46463 | + | Aldolase_II |
| pfam | PUL0770_HRGMv2_0215_C3 | HRGMv2_0215_82_34 | 46552 | 48093 | + | AraA_N | Arabinose_Iso_C | AraA_central |
| pfam | PUL0770_HRGMv2_0215_C3 | HRGMv2_0215_82_35 | 48116 | 49708 | + | FGGY_N | FGGY_C |
| CAZyme | PUL0770_HRGMv2_0215_C3 | HRGMv2_0215_82_36 | 49823 | 51394 | + | GH51_1 |
| pfam | PUL0770_HRGMv2_0215_C3 | HRGMv2_0215_82_37 | 51548 | 53569 | + | Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1 |
Gene ID: HRGMv2_0215_82_29
Type: sulfatase
Location: 41793 - 42980 (+)
Type: sulfatase
Location: 41793 - 42980 (+)
Gene ID: HRGMv2_0215_82_31
Type: TC
Location: 43133 - 44857 (+)
Type: TC
Location: 43133 - 44857 (+)
Gene ID: HRGMv2_0215_82_32
Type: STP
Location: 45017 - 45697 (+)
Type: STP
Location: 45017 - 45697 (+)
Gene ID: HRGMv2_0215_82_33
Type: pfam
Location: 45765 - 46463 (+)
Type: pfam
Location: 45765 - 46463 (+)
Gene ID: HRGMv2_0215_82_34
Type: pfam
Location: 46552 - 48093 (+)
Type: pfam
Location: 46552 - 48093 (+)
Gene ID: HRGMv2_0215_82_35
Type: pfam
Location: 48116 - 49708 (+)
Type: pfam
Location: 48116 - 49708 (+)
Gene ID: HRGMv2_0215_82_36
Type: CAZyme
Location: 49823 - 51394 (+)
Type: CAZyme
Location: 49823 - 51394 (+)
Gene ID: HRGMv2_0215_82_37
Type: pfam
Location: 51548 - 53569 (+)
Type: pfam
Location: 51548 - 53569 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella copri_A
Gene Composition
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