Cluster: PUL0770_HRGMv2_0180_C2
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: HRGMv2_0180
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | PUL0770_HRGMv2_0180_C2 | HRGMv2_0180_20_6 | 8113 | 10134 | - | Transketolase_N | Transket_pyr | Transketolase_C | Transketolase_C_1 |
| CAZyme | PUL0770_HRGMv2_0180_C2 | HRGMv2_0180_20_7 | 10240 | 11811 | - | GH51_1 |
| pfam | PUL0770_HRGMv2_0180_C2 | HRGMv2_0180_20_8 | 11894 | 13486 | - | FGGY_N | FGGY_C |
| pfam | PUL0770_HRGMv2_0180_C2 | HRGMv2_0180_20_9 | 13568 | 15109 | - | AraA_N | Arabinose_Iso_C | AraA_central |
| pfam | PUL0770_HRGMv2_0180_C2 | HRGMv2_0180_20_10 | 15176 | 15874 | - | Aldolase_II |
| STP | PUL0770_HRGMv2_0180_C2 | HRGMv2_0180_20_11 | 15902 | 16582 | - | NUDIX |
| TC | PUL0770_HRGMv2_0180_C2 | HRGMv2_0180_20_12 | 16786 | 18510 | - | 2.A.21.3.19 |
| sulfatase | PUL0770_HRGMv2_0180_C2 | HRGMv2_0180_20_13 | 18619 | 19806 | - | S1_4 |
Gene ID: HRGMv2_0180_20_6
Type: pfam
Location: 8113 - 10134 (-)
Type: pfam
Location: 8113 - 10134 (-)
Gene ID: HRGMv2_0180_20_7
Type: CAZyme
Location: 10240 - 11811 (-)
Type: CAZyme
Location: 10240 - 11811 (-)
Gene ID: HRGMv2_0180_20_8
Type: pfam
Location: 11894 - 13486 (-)
Type: pfam
Location: 11894 - 13486 (-)
Gene ID: HRGMv2_0180_20_9
Type: pfam
Location: 13568 - 15109 (-)
Type: pfam
Location: 13568 - 15109 (-)
Gene ID: HRGMv2_0180_20_10
Type: pfam
Location: 15176 - 15874 (-)
Type: pfam
Location: 15176 - 15874 (-)
Gene ID: HRGMv2_0180_20_11
Type: STP
Location: 15902 - 16582 (-)
Type: STP
Location: 15902 - 16582 (-)
Gene ID: HRGMv2_0180_20_12
Type: TC
Location: 16786 - 18510 (-)
Type: TC
Location: 16786 - 18510 (-)
Gene ID: HRGMv2_0180_20_13
Type: sulfatase
Location: 18619 - 19806 (-)
Type: sulfatase
Location: 18619 - 19806 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp934202525
Gene Composition
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