Cluster: PUL0769
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: PUL0769
- CGC Family ID: CGCFAM_00108
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_CP102288 | NQ544_RS10405 | 1 | 2442 | + | GH51_2 |
| NULL(UNKNOWN) | NZ_CP102288 | NQ544_RS10410 | 2586 | 2846 | - | NULL(UNKNOWN) |
| pfam | NZ_CP102288 | NQ544_RS10415 | 3114 | 4679 | + | PDDEXK_9 | AAA-ATPase_like |
| CAZyme | NZ_CP102288 | NQ544_RS10420 | 5069 | 6046 | - | GH43_5 |
| CAZyme | NZ_CP102288 | NQ544_RS10425 | 6205 | 7875 | - | GH43_4 |
| pfam | NZ_CP102288 | NQ544_RS10430 | 7998 | 9815 | - | Big_3 |
| pfam | NZ_CP102288 | NQ544_RS10435 | 9900 | 11657 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_CP102288 | NQ544_RS10440 | 11707 | 14910 | - | 1.B.14.6.1 |
| TF | NZ_CP102288 | NQ544_RS10445 | 15279 | 18272 | - | HTH_AraC | HTH_AraC |
Gene ID: NQ544_RS10405
Type: CAZyme
Location: 1 - 2442 (+)
Type: CAZyme
Location: 1 - 2442 (+)
Gene ID: NQ544_RS10410
Type: null
Location: 2586 - 2846 (-)
Type: null
Location: 2586 - 2846 (-)
Gene ID: NQ544_RS10415
Type: pfam
Location: 3114 - 4679 (+)
Type: pfam
Location: 3114 - 4679 (+)
Gene ID: NQ544_RS10420
Type: CAZyme
Location: 5069 - 6046 (-)
Type: CAZyme
Location: 5069 - 6046 (-)
Gene ID: NQ544_RS10425
Type: CAZyme
Location: 6205 - 7875 (-)
Type: CAZyme
Location: 6205 - 7875 (-)
Gene ID: NQ544_RS10430
Type: pfam
Location: 7998 - 9815 (-)
Type: pfam
Location: 7998 - 9815 (-)
Gene ID: NQ544_RS10435
Type: pfam
Location: 9900 - 11657 (-)
Type: pfam
Location: 9900 - 11657 (-)
Gene ID: NQ544_RS10440
Type: TC
Location: 11707 - 14910 (-)
Type: TC
Location: 11707 - 14910 (-)
Gene ID: NQ544_RS10445
Type: TF
Location: 15279 - 18272 (-)
Type: TF
Location: 15279 - 18272 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Species
Segatella copri
Gene Composition
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