Cluster: PUL0768
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: PUL0768
- CGC Family ID: CGCFAM_00031
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_CP102288 | NQ544_RS12960 | 1 | 2325 | + | CBM77 | PL1 |
| TC | NZ_CP102288 | NQ544_RS12965 | 2526 | 5492 | + | 1.B.14.6.1 |
| TC | NZ_CP102288 | NQ544_RS12970 | 5538 | 7223 | + | 8.A.46.1.1 |
| pfam | NZ_CP102288 | NQ544_RS12975 | 7236 | 8645 | + | SusE | DUF5111 | DUF5114 |
| CAZyme | NZ_CP102288 | NQ544_RS12980 | 8664 | 9758 | + | GH53 |
| CAZyme | NZ_CP102288 | NQ544_RS12985 | 9763 | 12213 | + | GH2 |
| TF | NZ_CP102288 | NQ544_RS12990 | 12356 | 15235 | + | HTH_AraC | HTH_AraC | HTH_AraC |
Gene ID: NQ544_RS12960
Type: CAZyme
Location: 1 - 2325 (+)
Type: CAZyme
Location: 1 - 2325 (+)
Gene ID: NQ544_RS12965
Type: TC
Location: 2526 - 5492 (+)
Type: TC
Location: 2526 - 5492 (+)
Gene ID: NQ544_RS12970
Type: TC
Location: 5538 - 7223 (+)
Type: TC
Location: 5538 - 7223 (+)
Gene ID: NQ544_RS12975
Type: pfam
Location: 7236 - 8645 (+)
Type: pfam
Location: 7236 - 8645 (+)
Gene ID: NQ544_RS12980
Type: CAZyme
Location: 8664 - 9758 (+)
Type: CAZyme
Location: 8664 - 9758 (+)
Gene ID: NQ544_RS12985
Type: CAZyme
Location: 9763 - 12213 (+)
Type: CAZyme
Location: 9763 - 12213 (+)
Gene ID: NQ544_RS12990
Type: TF
Location: 12356 - 15235 (+)
Type: TF
Location: 12356 - 15235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Species
Segatella copri
Gene Composition
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