Cluster: PUL0767
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate: pectin
- Genome ID: PUL0767
- CGC Family ID: CGCFAM_00821
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_CP102288 | NQ544_RS01765 | 1 | 1791 | - | CBM91 | GH43_10 |
| CAZyme | NZ_CP102288 | NQ544_RS01770 | 1813 | 3798 | - | GH28 |
| TC | NZ_CP102288 | NQ544_RS01775 | 4041 | 5750 | - | 8.A.46.1.3 |
| TC | NZ_CP102288 | NQ544_RS01780 | 5775 | 9050 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | NZ_CP102288 | NQ544_RS01785 | 10381 | 10668 | - | NULL(UNKNOWN) |
| pfam | NZ_CP102288 | NQ544_RS01790 | 10890 | 12488 | - | DUF4957 | DUF5123 |
| sulfatase | NZ_CP102288 | NQ544_RS01795 | 12553 | 14490 | - | S1_27 |
| TC | NZ_CP102288 | NQ544_RS01800 | 14509 | 17745 | - | 1.B.14.6.1 |
| CAZyme | NZ_CP102288 | NQ544_RS01805 | 18177 | 21569 | - | CE8 |
| CAZyme | NZ_CP102288 | NQ544_RS01810 | 21801 | 25532 | - | GH95 |
| NULL(UNKNOWN) | NZ_CP102288 | NQ544_RS01820 | 26303 | 27004 | + | NULL(UNKNOWN) |
| CAZyme | NZ_CP102288 | NQ544_RS01825 | 27078 | 28871 | - | PL1_2 |
| CAZyme | NZ_CP102288 | NQ544_RS01830 | 28930 | 31551 | - | GH105 | GH28 |
| STP | NZ_CP102288 | NQ544_RS01835 | 31833 | 32429 | + | Sigma70_r2 | Sigma70_r4_2 |
| pfam | NZ_CP102288 | NQ544_RS01840 | 32426 | 32429 | - | Ribul_P_3_epim |
Gene ID: NQ544_RS01765
Type: CAZyme
Location: 1 - 1791 (-)
Type: CAZyme
Location: 1 - 1791 (-)
Gene ID: NQ544_RS01770
Type: CAZyme
Location: 1813 - 3798 (-)
Type: CAZyme
Location: 1813 - 3798 (-)
Gene ID: NQ544_RS01775
Type: TC
Location: 4041 - 5750 (-)
Type: TC
Location: 4041 - 5750 (-)
Gene ID: NQ544_RS01780
Type: TC
Location: 5775 - 9050 (-)
Type: TC
Location: 5775 - 9050 (-)
Gene ID: NQ544_RS01785
Type: null
Location: 10381 - 10668 (-)
Type: null
Location: 10381 - 10668 (-)
Gene ID: NQ544_RS01790
Type: pfam
Location: 10890 - 12488 (-)
Type: pfam
Location: 10890 - 12488 (-)
Gene ID: NQ544_RS01795
Type: sulfatase
Location: 12553 - 14490 (-)
Type: sulfatase
Location: 12553 - 14490 (-)
Gene ID: NQ544_RS01800
Type: TC
Location: 14509 - 17745 (-)
Type: TC
Location: 14509 - 17745 (-)
Gene ID: NQ544_RS01805
Type: CAZyme
Location: 18177 - 21569 (-)
Type: CAZyme
Location: 18177 - 21569 (-)
Gene ID: NQ544_RS01810
Type: CAZyme
Location: 21801 - 25532 (-)
Type: CAZyme
Location: 21801 - 25532 (-)
Gene ID: NQ544_RS01820
Type: null
Location: 26303 - 27004 (+)
Type: null
Location: 26303 - 27004 (+)
Gene ID: NQ544_RS01825
Type: CAZyme
Location: 27078 - 28871 (-)
Type: CAZyme
Location: 27078 - 28871 (-)
Gene ID: NQ544_RS01830
Type: CAZyme
Location: 28930 - 31551 (-)
Type: CAZyme
Location: 28930 - 31551 (-)
Gene ID: NQ544_RS01835
Type: STP
Location: 31833 - 32429 (+)
Type: STP
Location: 31833 - 32429 (+)
Gene ID: NQ544_RS01840
Type: pfam
Location: 32426 - 32429 (-)
Type: pfam
Location: 32426 - 32429 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Segatella
Species
Segatella copri
Gene Composition
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