Cluster: PUL0750_HRGMv2_0180_C0
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate: beta-glucan
- Genome ID: HRGMv2_0180
- CGC Family ID: CGCFAM_06456
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | PUL0750_HRGMv2_0180_C0 | HRGMv2_0180_11_2 | 5685 | 8180 | + | GH94 |
| NULL(UNKNOWN) | PUL0750_HRGMv2_0180_C0 | HRGMv2_0180_11_3 | 8973 | 9392 | + | NULL(UNKNOWN) |
| pfam | PUL0750_HRGMv2_0180_C0 | HRGMv2_0180_11_6 | 12227 | 13498 | - | UxuA |
| pfam | PUL0750_HRGMv2_0180_C0 | HRGMv2_0180_11_7 | 13532 | 15121 | - | Mannitol_dh | Mannitol_dh_C |
| CAZyme | PUL0750_HRGMv2_0180_C0 | HRGMv2_0180_11_9 | 15441 | 17759 | - | GH3 |
| NULL(UNKNOWN) | PUL0750_HRGMv2_0180_C0 | HRGMv2_0180_11_10 | 17812 | 18786 | - | NULL(UNKNOWN) |
| TC | PUL0750_HRGMv2_0180_C0 | HRGMv2_0180_11_11 | 18876 | 20657 | - | 8.A.46.2.2 |
| TC | PUL0750_HRGMv2_0180_C0 | HRGMv2_0180_11_12 | 20715 | 23891 | - | 1.B.14.6.2 |
| CAZyme | PUL0750_HRGMv2_0180_C0 | HRGMv2_0180_11_13 | 23924 | 25138 | - | GH5_4 |
Gene ID: HRGMv2_0180_11_2
Type: CAZyme
Location: 5685 - 8180 (+)
Type: CAZyme
Location: 5685 - 8180 (+)
Gene ID: HRGMv2_0180_11_3
Type: null
Location: 8973 - 9392 (+)
Type: null
Location: 8973 - 9392 (+)
Gene ID: HRGMv2_0180_11_6
Type: pfam
Location: 12227 - 13498 (-)
Type: pfam
Location: 12227 - 13498 (-)
Gene ID: HRGMv2_0180_11_7
Type: pfam
Location: 13532 - 15121 (-)
Type: pfam
Location: 13532 - 15121 (-)
Gene ID: HRGMv2_0180_11_9
Type: CAZyme
Location: 15441 - 17759 (-)
Type: CAZyme
Location: 15441 - 17759 (-)
Gene ID: HRGMv2_0180_11_10
Type: null
Location: 17812 - 18786 (-)
Type: null
Location: 17812 - 18786 (-)
Gene ID: HRGMv2_0180_11_11
Type: TC
Location: 18876 - 20657 (-)
Type: TC
Location: 18876 - 20657 (-)
Gene ID: HRGMv2_0180_11_12
Type: TC
Location: 20715 - 23891 (-)
Type: TC
Location: 20715 - 23891 (-)
Gene ID: HRGMv2_0180_11_13
Type: CAZyme
Location: 23924 - 25138 (-)
Type: CAZyme
Location: 23924 - 25138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp934202525
Gene Composition
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