Cluster: PUL0743
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 6
- Substrate: xylan
- Genome ID: PUL0743
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | NC_011898 | CCEL_RS06265 | 1 | 1725 | + | 8.A.59.2.1 |
| TF | NC_011898 | CCEL_RS06270 | 1730 | 3430 | + | HTH_AraC | HTH_AraC |
| TC | NC_011898 | CCEL_RS06275 | 3589 | 5304 | + | 3.A.1.1.9 |
| TC | NC_011898 | CCEL_RS06280 | 5410 | 6312 | + | 3.A.1.1.9 |
| TC | NC_011898 | CCEL_RS06285 | 6327 | 7211 | + | 3.A.1.1.9 |
| CAZyme | NC_011898 | CCEL_RS06290 | 7357 | 8835 | + | GH51_1 |
| pfam | NC_011898 | CCEL_RS06295 | 8944 | 9198 | + | DUF6171 |
| CAZyme | NC_011898 | CCEL_RS06300 | 9246 | 10748 | + | CBM91 | GH43_10 |
| CAZyme | NC_011898 | CCEL_RS06305 | 10766 | 11896 | + | GH8 |
| CAZyme | NC_011898 | CCEL_RS06310 | 11963 | 13468 | + | GH39 |
| CAZyme | NC_011898 | CCEL_RS06315 | 13516 | 14313 | + | CE1 |
| NULL(UNKNOWN) | NC_011898 | CCEL_RS06320 | 14366 | 16564 | + | NULL(UNKNOWN) |
| CAZyme | NC_011898 | CCEL_RS06325 | 16603 | 18498 | + | CE20 | CE20 |
Gene ID: CCEL_RS06265
Type: TC
Location: 1 - 1725 (+)
Type: TC
Location: 1 - 1725 (+)
Gene ID: CCEL_RS06270
Type: TF
Location: 1730 - 3430 (+)
Type: TF
Location: 1730 - 3430 (+)
Gene ID: CCEL_RS06275
Type: TC
Location: 3589 - 5304 (+)
Type: TC
Location: 3589 - 5304 (+)
Gene ID: CCEL_RS06280
Type: TC
Location: 5410 - 6312 (+)
Type: TC
Location: 5410 - 6312 (+)
Gene ID: CCEL_RS06285
Type: TC
Location: 6327 - 7211 (+)
Type: TC
Location: 6327 - 7211 (+)
Gene ID: CCEL_RS06290
Type: CAZyme
Location: 7357 - 8835 (+)
Type: CAZyme
Location: 7357 - 8835 (+)
Gene ID: CCEL_RS06295
Type: pfam
Location: 8944 - 9198 (+)
Type: pfam
Location: 8944 - 9198 (+)
Gene ID: CCEL_RS06300
Type: CAZyme
Location: 9246 - 10748 (+)
Type: CAZyme
Location: 9246 - 10748 (+)
Gene ID: CCEL_RS06305
Type: CAZyme
Location: 10766 - 11896 (+)
Type: CAZyme
Location: 10766 - 11896 (+)
Gene ID: CCEL_RS06310
Type: CAZyme
Location: 11963 - 13468 (+)
Type: CAZyme
Location: 11963 - 13468 (+)
Gene ID: CCEL_RS06315
Type: CAZyme
Location: 13516 - 14313 (+)
Type: CAZyme
Location: 13516 - 14313 (+)
Gene ID: CCEL_RS06320
Type: null
Location: 14366 - 16564 (+)
Type: null
Location: 14366 - 16564 (+)
Gene ID: CCEL_RS06325
Type: CAZyme
Location: 16603 - 18498 (+)
Type: CAZyme
Location: 16603 - 18498 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminiclostridium
Species
Ruminiclostridium cellulolyticum
Gene Composition
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