Cluster: PUL0735
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate: arabinogalactan
- Genome ID: PUL0735
- CGC Family ID: CGCFAM_00936
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_JDUC01000011 | OU05_RS07025 | 1 | 2229 | + | GH127 |
| TF | NZ_JDUC01000011 | OU05_RS07030 | 2257 | 3222 | + | HTH_AraC | HTH_AraC |
| TF | NZ_JDUC01000011 | OU05_RS07035 | 3394 | 4551 | - | LacI |
| CAZyme | NZ_JDUC01000011 | OU05_RS07040 | 4970 | 6334 | + | GH27 |
| TC | NZ_JDUC01000011 | OU05_RS07045 | 7086 | 8996 | + | 3.A.1.106.3 |
| TC | NZ_JDUC01000011 | OU05_RS07050 | 9007 | 10815 | + | 3.A.1.106.3 |
| CAZyme | NZ_JDUC01000011 | OU05_RS07055 | 11078 | 13543 | + | GH51_2 |
| NULL(UNKNOWN) | NZ_JDUC01000011 | OU05_RS07060 | 13527 | 13739 | + | NULL(UNKNOWN) |
| CAZyme | NZ_JDUC01000011 | OU05_RS07065 | 13893 | 15638 | - | GH43_4 |
| CAZyme | NZ_JDUC01000011 | OU05_RS07070 | 15795 | 17390 | - | GH43_4 |
| CAZyme | NZ_JDUC01000011 | OU05_RS07075 | 17506 | 19638 | + | GH43_27 |
| TF | NZ_JDUC01000011 | OU05_RS07080 | 19754 | 20812 | + | LacI |
| peptidase | NZ_JDUC01000011 | OU05_RS07085 | 20924 | 21868 | - | S09.UPC |
| CAZyme | NZ_JDUC01000011 | OU05_RS07090 | 22133 | 23167 | + | GH43_26 |
| STP | NZ_JDUC01000011 | OU05_RS07095 | 23585 | 24901 | + | SBP_bac_1 |
| TC | NZ_JDUC01000011 | OU05_RS07100 | 25040 | 25993 | + | 3.A.1.1.36 |
| TC | NZ_JDUC01000011 | OU05_RS07105 | 25990 | 26916 | + | 3.A.1.1.36 |
Gene ID: OU05_RS07025
Type: CAZyme
Location: 1 - 2229 (+)
Type: CAZyme
Location: 1 - 2229 (+)
Gene ID: OU05_RS07030
Type: TF
Location: 2257 - 3222 (+)
Type: TF
Location: 2257 - 3222 (+)
Gene ID: OU05_RS07035
Type: TF
Location: 3394 - 4551 (-)
Type: TF
Location: 3394 - 4551 (-)
Gene ID: OU05_RS07040
Type: CAZyme
Location: 4970 - 6334 (+)
Type: CAZyme
Location: 4970 - 6334 (+)
Gene ID: OU05_RS07045
Type: TC
Location: 7086 - 8996 (+)
Type: TC
Location: 7086 - 8996 (+)
Gene ID: OU05_RS07050
Type: TC
Location: 9007 - 10815 (+)
Type: TC
Location: 9007 - 10815 (+)
Gene ID: OU05_RS07055
Type: CAZyme
Location: 11078 - 13543 (+)
Type: CAZyme
Location: 11078 - 13543 (+)
Gene ID: OU05_RS07060
Type: null
Location: 13527 - 13739 (+)
Type: null
Location: 13527 - 13739 (+)
Gene ID: OU05_RS07065
Type: CAZyme
Location: 13893 - 15638 (-)
Type: CAZyme
Location: 13893 - 15638 (-)
Gene ID: OU05_RS07070
Type: CAZyme
Location: 15795 - 17390 (-)
Type: CAZyme
Location: 15795 - 17390 (-)
Gene ID: OU05_RS07075
Type: CAZyme
Location: 17506 - 19638 (+)
Type: CAZyme
Location: 17506 - 19638 (+)
Gene ID: OU05_RS07080
Type: TF
Location: 19754 - 20812 (+)
Type: TF
Location: 19754 - 20812 (+)
Gene ID: OU05_RS07085
Type: peptidase
Location: 20924 - 21868 (-)
Type: peptidase
Location: 20924 - 21868 (-)
Gene ID: OU05_RS07090
Type: CAZyme
Location: 22133 - 23167 (+)
Type: CAZyme
Location: 22133 - 23167 (+)
Gene ID: OU05_RS07095
Type: STP
Location: 23585 - 24901 (+)
Type: STP
Location: 23585 - 24901 (+)
Gene ID: OU05_RS07100
Type: TC
Location: 25040 - 25993 (+)
Type: TC
Location: 25040 - 25993 (+)
Gene ID: OU05_RS07105
Type: TC
Location: 25990 - 26916 (+)
Type: TC
Location: 25990 - 26916 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium longum
Gene Composition
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