Cluster: PUL0728_MGYG000000870_C1
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 4
- Substrate: host glycan
- Genome ID: MGYG000000870
- CGC Family ID: CGCFAM_01239
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| peptidase | PUL0728_MGYG000000870_C1 | MGYG000000870_26_5 | 5606 | 6310 | - | C82.UPA |
| CAZyme | PUL0728_MGYG000000870_C1 | MGYG000000870_26_6 | 6341 | 6814 | - | CBM50 |
| pfam | PUL0728_MGYG000000870_C1 | MGYG000000870_26_7 | 6883 | 7698 | - | TatD_DNase |
| pfam | PUL0728_MGYG000000870_C1 | MGYG000000870_26_8 | 7805 | 8890 | + | LpxR |
| CAZyme | PUL0728_MGYG000000870_C1 | MGYG000000870_26_9 | 9033 | 12833 | + | CBM32 | GH2 |
| pfam | PUL0728_MGYG000000870_C1 | MGYG000000870_26_10 | 13180 | 13872 | - | PEP-CTERM |
| NULL(UNKNOWN) | PUL0728_MGYG000000870_C1 | MGYG000000870_26_11 | 13885 | 14895 | - | NULL(UNKNOWN) |
| CAZyme | PUL0728_MGYG000000870_C1 | MGYG000000870_26_12 | 15015 | 16415 | - | GH29 |
| STP | PUL0728_MGYG000000870_C1 | MGYG000000870_26_13 | 16805 | 19483 | + | HATPase_c | HisKA |
| TF | PUL0728_MGYG000000870_C1 | MGYG000000870_26_14 | 19502 | 20200 | + | Trans_reg_C |
| TC | PUL0728_MGYG000000870_C1 | MGYG000000870_26_15 | 20354 | 21124 | + | 1.B.71.1.5 |
| TC | PUL0728_MGYG000000870_C1 | MGYG000000870_26_16 | 21239 | 22939 | + | 3.A.3.7.2 |
| TC | PUL0728_MGYG000000870_C1 | MGYG000000870_26_17 | 22970 | 25084 | + | 3.A.3.7.2 |
| TC | PUL0728_MGYG000000870_C1 | MGYG000000870_26_18 | 25114 | 25680 | + | 3.A.3.7.2 |
| CAZyme | PUL0728_MGYG000000870_C1 | MGYG000000870_26_19 | 25830 | 27434 | - | GH27 |
| TC | PUL0728_MGYG000000870_C1 | MGYG000000870_26_20 | 27661 | 30204 | + | 3.A.9.1.2 |
Gene ID: MGYG000000870_26_5
Type: peptidase
Location: 5606 - 6310 (-)
Type: peptidase
Location: 5606 - 6310 (-)
Gene ID: MGYG000000870_26_6
Type: CAZyme
Location: 6341 - 6814 (-)
Type: CAZyme
Location: 6341 - 6814 (-)
Gene ID: MGYG000000870_26_7
Type: pfam
Location: 6883 - 7698 (-)
Type: pfam
Location: 6883 - 7698 (-)
Gene ID: MGYG000000870_26_8
Type: pfam
Location: 7805 - 8890 (+)
Type: pfam
Location: 7805 - 8890 (+)
Gene ID: MGYG000000870_26_9
Type: CAZyme
Location: 9033 - 12833 (+)
Type: CAZyme
Location: 9033 - 12833 (+)
Gene ID: MGYG000000870_26_10
Type: pfam
Location: 13180 - 13872 (-)
Type: pfam
Location: 13180 - 13872 (-)
Gene ID: MGYG000000870_26_11
Type: null
Location: 13885 - 14895 (-)
Type: null
Location: 13885 - 14895 (-)
Gene ID: MGYG000000870_26_12
Type: CAZyme
Location: 15015 - 16415 (-)
Type: CAZyme
Location: 15015 - 16415 (-)
Gene ID: MGYG000000870_26_13
Type: STP
Location: 16805 - 19483 (+)
Type: STP
Location: 16805 - 19483 (+)
Gene ID: MGYG000000870_26_14
Type: TF
Location: 19502 - 20200 (+)
Type: TF
Location: 19502 - 20200 (+)
Gene ID: MGYG000000870_26_15
Type: TC
Location: 20354 - 21124 (+)
Type: TC
Location: 20354 - 21124 (+)
Gene ID: MGYG000000870_26_16
Type: TC
Location: 21239 - 22939 (+)
Type: TC
Location: 21239 - 22939 (+)
Gene ID: MGYG000000870_26_17
Type: TC
Location: 22970 - 25084 (+)
Type: TC
Location: 22970 - 25084 (+)
Gene ID: MGYG000000870_26_18
Type: TC
Location: 25114 - 25680 (+)
Type: TC
Location: 25114 - 25680 (+)
Gene ID: MGYG000000870_26_19
Type: CAZyme
Location: 25830 - 27434 (-)
Type: CAZyme
Location: 25830 - 27434 (-)
Gene ID: MGYG000000870_26_20
Type: TC
Location: 27661 - 30204 (+)
Type: TC
Location: 27661 - 30204 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Verrucomicrobiota
Class
Verrucomicrobiae
Order
Verrucomicrobiales
Family
Akkermansiaceae
Genus
Akkermansia
Species
Akkermansia sp004167605
Gene Composition
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