Cluster: PUL0724
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 12
- Substrate: pectin
- Genome ID: PUL0724
- CGC Family ID: CGCFAM_01809
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| pfam | NC_009614 | BVU_RS00885 | 1595 | 3733 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | NC_009614 | BVU_RS00890 | 3823 | 4140 | + | NULL(UNKNOWN) |
| CAZyme | NC_009614 | BVU_RS00895 | 4384 | 6165 | + | GH78 |
| CAZyme | NC_009614 | BVU_RS00900 | 6208 | 7491 | + | CE15 |
| CAZyme | NC_009614 | BVU_RS00905 | 7507 | 9360 | + | PL11 |
| CAZyme | NC_009614 | BVU_RS00910 | 9474 | 12761 | + | GH106 | GH28 |
| CAZyme | NC_009614 | BVU_RS00915 | 12905 | 14035 | + | GH105 |
| CAZyme | NC_009614 | BVU_RS00920 | 14154 | 16268 | - | GH42 |
| CAZyme | NC_009614 | BVU_RS00925 | 16247 | 18601 | - | CBM32 | GH43_18 | GH43_34 |
| CAZyme | NC_009614 | BVU_RS00930 | 18813 | 21680 | + | GH2 |
| CAZyme | NC_009614 | BVU_RS00935 | 21699 | 22973 | + | CE12 |
| CAZyme | NC_009614 | BVU_RS00940 | 22991 | 24475 | + | GH28 |
| pfam | NC_009614 | BVU_RS00945 | 24453 | 25151 | + | DUF4450 |
| NULL(UNKNOWN) | NC_009614 | BVU_RS00950 | 25148 | 25951 | + | NULL(UNKNOWN) |
| CAZyme | NC_009614 | BVU_RS00955 | 25967 | 27391 | + | GH28 |
| CAZyme | NC_009614 | BVU_RS00960 | 27408 | 30170 | + | GH106 |
Gene ID: BVU_RS00885
Type: pfam
Location: 1595 - 3733 (+)
Type: pfam
Location: 1595 - 3733 (+)
Gene ID: BVU_RS00890
Type: null
Location: 3823 - 4140 (+)
Type: null
Location: 3823 - 4140 (+)
Gene ID: BVU_RS00895
Type: CAZyme
Location: 4384 - 6165 (+)
Type: CAZyme
Location: 4384 - 6165 (+)
Gene ID: BVU_RS00900
Type: CAZyme
Location: 6208 - 7491 (+)
Type: CAZyme
Location: 6208 - 7491 (+)
Gene ID: BVU_RS00905
Type: CAZyme
Location: 7507 - 9360 (+)
Type: CAZyme
Location: 7507 - 9360 (+)
Gene ID: BVU_RS00910
Type: CAZyme
Location: 9474 - 12761 (+)
Type: CAZyme
Location: 9474 - 12761 (+)
Gene ID: BVU_RS00915
Type: CAZyme
Location: 12905 - 14035 (+)
Type: CAZyme
Location: 12905 - 14035 (+)
Gene ID: BVU_RS00920
Type: CAZyme
Location: 14154 - 16268 (-)
Type: CAZyme
Location: 14154 - 16268 (-)
Gene ID: BVU_RS00925
Type: CAZyme
Location: 16247 - 18601 (-)
Type: CAZyme
Location: 16247 - 18601 (-)
Gene ID: BVU_RS00930
Type: CAZyme
Location: 18813 - 21680 (+)
Type: CAZyme
Location: 18813 - 21680 (+)
Gene ID: BVU_RS00935
Type: CAZyme
Location: 21699 - 22973 (+)
Type: CAZyme
Location: 21699 - 22973 (+)
Gene ID: BVU_RS00940
Type: CAZyme
Location: 22991 - 24475 (+)
Type: CAZyme
Location: 22991 - 24475 (+)
Gene ID: BVU_RS00945
Type: pfam
Location: 24453 - 25151 (+)
Type: pfam
Location: 24453 - 25151 (+)
Gene ID: BVU_RS00950
Type: null
Location: 25148 - 25951 (+)
Type: null
Location: 25148 - 25951 (+)
Gene ID: BVU_RS00955
Type: CAZyme
Location: 25967 - 27391 (+)
Type: CAZyme
Location: 25967 - 27391 (+)
Gene ID: BVU_RS00960
Type: CAZyme
Location: 27408 - 30170 (+)
Type: CAZyme
Location: 27408 - 30170 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola vulgatus
Gene Composition
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