Cluster: PUL0723
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 12
- Substrate: pectin
- Genome ID: PUL0723
- CGC Family ID: CGCFAM_00927
- Continent: NA
- Source Study: dbCAN-PUL Database →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | NZ_DS995531 | BACDOR_RS19925 | 1 | 2763 | - | GH106 |
| CAZyme | NZ_DS995531 | BACDOR_RS19920 | 2776 | 4203 | - | GH28 |
| NULL(UNKNOWN) | NZ_DS995531 | BACDOR_RS19915 | 4219 | 5022 | - | NULL(UNKNOWN) |
| pfam | NZ_DS995531 | BACDOR_RS19910 | 5019 | 5717 | - | DUF4450 |
| CAZyme | NZ_DS995531 | BACDOR_RS19905 | 5695 | 7179 | - | GH28 |
| CAZyme | NZ_DS995531 | BACDOR_RS19900 | 7197 | 8471 | - | CE12 |
| CAZyme | NZ_DS995531 | BACDOR_RS19895 | 8490 | 11357 | - | GH2 |
| CAZyme | NZ_DS995531 | BACDOR_RS19890 | 11569 | 13923 | + | CBM32 | GH43_18 | GH43_34 |
| CAZyme | NZ_DS995531 | BACDOR_RS19885 | 13902 | 16016 | + | GH42 |
| CAZyme | NZ_DS995531 | BACDOR_RS19880 | 16135 | 17265 | - | GH105 |
| CAZyme | NZ_DS995531 | BACDOR_RS19875 | 17409 | 20696 | - | GH106 | GH28 |
| CAZyme | NZ_DS995531 | BACDOR_RS19870 | 20810 | 22663 | - | PL11 |
| CAZyme | NZ_DS995531 | BACDOR_RS19865 | 22679 | 23962 | - | CE15 |
| CAZyme | NZ_DS995531 | BACDOR_RS19860 | 24005 | 25786 | - | GH78 |
| NULL(UNKNOWN) | NZ_DS995531 | BACDOR_RS19855 | 26029 | 26346 | - | NULL(UNKNOWN) |
| pfam | NZ_DS995531 | BACDOR_RS19850 | 26437 | 28575 | - | SusD_RagB | SusD-like_3 |
| TC | NZ_DS995531 | BACDOR_RS19845 | 28607 | 31384 | - | 1.B.14.6.1 |
Gene ID: BACDOR_RS19925
Type: CAZyme
Location: 1 - 2763 (-)
Type: CAZyme
Location: 1 - 2763 (-)
Gene ID: BACDOR_RS19920
Type: CAZyme
Location: 2776 - 4203 (-)
Type: CAZyme
Location: 2776 - 4203 (-)
Gene ID: BACDOR_RS19915
Type: null
Location: 4219 - 5022 (-)
Type: null
Location: 4219 - 5022 (-)
Gene ID: BACDOR_RS19910
Type: pfam
Location: 5019 - 5717 (-)
Type: pfam
Location: 5019 - 5717 (-)
Gene ID: BACDOR_RS19905
Type: CAZyme
Location: 5695 - 7179 (-)
Type: CAZyme
Location: 5695 - 7179 (-)
Gene ID: BACDOR_RS19900
Type: CAZyme
Location: 7197 - 8471 (-)
Type: CAZyme
Location: 7197 - 8471 (-)
Gene ID: BACDOR_RS19895
Type: CAZyme
Location: 8490 - 11357 (-)
Type: CAZyme
Location: 8490 - 11357 (-)
Gene ID: BACDOR_RS19890
Type: CAZyme
Location: 11569 - 13923 (+)
Type: CAZyme
Location: 11569 - 13923 (+)
Gene ID: BACDOR_RS19885
Type: CAZyme
Location: 13902 - 16016 (+)
Type: CAZyme
Location: 13902 - 16016 (+)
Gene ID: BACDOR_RS19880
Type: CAZyme
Location: 16135 - 17265 (-)
Type: CAZyme
Location: 16135 - 17265 (-)
Gene ID: BACDOR_RS19875
Type: CAZyme
Location: 17409 - 20696 (-)
Type: CAZyme
Location: 17409 - 20696 (-)
Gene ID: BACDOR_RS19870
Type: CAZyme
Location: 20810 - 22663 (-)
Type: CAZyme
Location: 20810 - 22663 (-)
Gene ID: BACDOR_RS19865
Type: CAZyme
Location: 22679 - 23962 (-)
Type: CAZyme
Location: 22679 - 23962 (-)
Gene ID: BACDOR_RS19860
Type: CAZyme
Location: 24005 - 25786 (-)
Type: CAZyme
Location: 24005 - 25786 (-)
Gene ID: BACDOR_RS19855
Type: null
Location: 26029 - 26346 (-)
Type: null
Location: 26029 - 26346 (-)
Gene ID: BACDOR_RS19850
Type: pfam
Location: 26437 - 28575 (-)
Type: pfam
Location: 26437 - 28575 (-)
Gene ID: BACDOR_RS19845
Type: TC
Location: 28607 - 31384 (-)
Type: TC
Location: 28607 - 31384 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola dorei
Gene Composition
Loading chart...
← Back to Cluster List