Cluster: PUL0718_Rep_499_C1
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate: alginate
- Genome ID: Rep_499
- CGC Family ID: CGCFAM_00331
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TF | PUL0718_Rep_499_C1 | Rep_499_c_16_30 | 58376 | 59095 | - | GntR |
| TC | PUL0718_Rep_499_C1 | Rep_499_c_16_31 | 59337 | 62519 | + | 1.B.14.6.1 |
| TC | PUL0718_Rep_499_C1 | Rep_499_c_16_32 | 62532 | 64052 | + | 8.A.46.1.5 |
| CAZyme | PUL0718_Rep_499_C1 | Rep_499_c_16_34 | 65759 | 68020 | + | PL6 | PL6_1 |
| CAZyme | PUL0718_Rep_499_C1 | Rep_499_c_16_35 | 68067 | 70274 | + | PL17 | PL17_2 |
| STP | PUL0718_Rep_499_C1 | Rep_499_c_16_36 | 70298 | 70642 | + | AraC_binding |
| TC | PUL0718_Rep_499_C1 | Rep_499_c_16_37 | 70647 | 72113 | + | 2.A.1.14.25 |
| pfam | PUL0718_Rep_499_C1 | Rep_499_c_16_38 | 72138 | 72890 | + | adh_short | KR | adh_short_C2 | SDR |
| CAZyme | PUL0718_Rep_499_C1 | Rep_499_c_16_39 | 73011 | 74213 | + | PL38 |
| peptidase | PUL0718_Rep_499_C1 | Rep_499_c_16_40 | 74263 | 75252 | + | S09.UPB |
| NULL(UNKNOWN) | PUL0718_Rep_499_C1 | Rep_499_c_16_41 | 75259 | 76152 | + | NULL(UNKNOWN) |
Gene ID: Rep_499_c_16_30
Type: TF
Location: 58376 - 59095 (-)
Type: TF
Location: 58376 - 59095 (-)
Gene ID: Rep_499_c_16_31
Type: TC
Location: 59337 - 62519 (+)
Type: TC
Location: 59337 - 62519 (+)
Gene ID: Rep_499_c_16_32
Type: TC
Location: 62532 - 64052 (+)
Type: TC
Location: 62532 - 64052 (+)
Gene ID: Rep_499_c_16_34
Type: CAZyme
Location: 65759 - 68020 (+)
Type: CAZyme
Location: 65759 - 68020 (+)
Gene ID: Rep_499_c_16_35
Type: CAZyme
Location: 68067 - 70274 (+)
Type: CAZyme
Location: 68067 - 70274 (+)
Gene ID: Rep_499_c_16_36
Type: STP
Location: 70298 - 70642 (+)
Type: STP
Location: 70298 - 70642 (+)
Gene ID: Rep_499_c_16_37
Type: TC
Location: 70647 - 72113 (+)
Type: TC
Location: 70647 - 72113 (+)
Gene ID: Rep_499_c_16_38
Type: pfam
Location: 72138 - 72890 (+)
Type: pfam
Location: 72138 - 72890 (+)
Gene ID: Rep_499_c_16_39
Type: CAZyme
Location: 73011 - 74213 (+)
Type: CAZyme
Location: 73011 - 74213 (+)
Gene ID: Rep_499_c_16_40
Type: peptidase
Location: 74263 - 75252 (+)
Type: peptidase
Location: 74263 - 75252 (+)
Gene ID: Rep_499_c_16_41
Type: null
Location: 75259 - 76152 (+)
Type: null
Location: 75259 - 76152 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp902491285
Gene Composition
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